RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 NOP58Q9Y2X3 529 aaKnown RBP6.92□□□□□ -1.3
COPS3-209ENST00000486810 KDM2BQ8NHM5 1336 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 TSPAN15O95858 294 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 FBLN1P23142 703 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 GLDCP23378 1020 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 LTBRP36941 435 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 MAPKAPK2P49137 400 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 CDR1P51861 262 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 EPHB3P54753 998 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 DLG4P78352 724 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 KCNAB2Q13303 367 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 NR1I3Q14994 352 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 FAM209AQ5JX71 171 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 KCNT2Q6UVM3 1135 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 NSMFQ6X4W1 530 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 TMC6Q7Z403 805 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 ZBTB38Q8NAP3 1195 aaPredicted RBP6.91□□□□□ -1.3
COPS3-209ENST00000486810 UBXN4Q92575 508 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 KCNN1Q92952 543 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 EXOC2Q96KP1 924 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 CD320Q9NPF0 282 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 SIT1Q9Y3P8 196 aa6.91□□□□□ -1.3
COPS3-209ENST00000486810 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
COPS3-209ENST00000486810 F8W031 263 aaPredicted RBP6.9□□□□□ -1.3
COPS3-209ENST00000486810 SEMA7AO75326 666 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 NTRK1P04629 796 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 RPL11P62913 178 aaKnown RBP6.9□□□□□ -1.3
COPS3-209ENST00000486810 TAF3Q5VWG9 929 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 ATG14Q6ZNE5 492 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 JMYQ8N9B5 988 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 SLC38A3Q99624 504 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 BTG4Q9NY30 223 aa6.9□□□□□ -1.3
COPS3-209ENST00000486810 ASXL2Q76L83 1435 aa6.9□□□□□ -1.31
COPS3-209ENST00000486810 A0A1W2PQJ5 194 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 C22orf46C9J442 243 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 ABLIM1O14639 778 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 C6orf222P0C671 652 aaPredicted RBP6.89□□□□□ -1.31
COPS3-209ENST00000486810 PRR5P85299 388 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 OS9Q13438 667 aaPredicted RBP6.89□□□□□ -1.31
COPS3-209ENST00000486810 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 ZC3H14Q6PJT7 736 aaKnown RBP6.89□□□□□ -1.31
COPS3-209ENST00000486810 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 NETO2Q8NC67 525 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 PIF1Q9H611 641 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 BCAS3Q9H6U6 928 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 PPARGC1AQ9UBK2 798 aaKnown RBP6.89□□□□□ -1.31
COPS3-209ENST00000486810 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 PCDHA2Q9Y5H9 948 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 X6R8D5 127 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
COPS3-209ENST00000486810 PLEKHD1A6NEE1 506 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 TTC36A6NLP5 189 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 TMEM253P0C7T8 217 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 NCKAP1LP55160 1127 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 ZNF200P98182 395 aaPredicted RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 BMS1Q14692 1282 aaKnown RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 CEP68Q76N32 757 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 KISS1RQ969F8 398 aaPredicted RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 PPP1R16BQ96T49 567 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 PHF20Q9BVI0 1012 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 EPB41L4AQ9HCS5 686 aaPredicted RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
COPS3-209ENST00000486810 SMG5Q9UPR3 1016 aaKnown RBP6.88□□□□□ -1.31
COPS3-209ENST00000486810 TRBV23-1A0A0A0MS06 115 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 LSAMPQ13449 338 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 TMEM132EQ6IEE7 984 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 TMEFF1Q8IYR6 380 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 USP33Q8TEY7 942 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 DCAF4Q8WV16 495 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 KANSL2Q9H9L4 492 aa6.87□□□□□ -1.31
COPS3-209ENST00000486810 NFIBO00712 420 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 IRS4O14654 1257 aaPredicted RBP6.86□□□□□ -1.31
COPS3-209ENST00000486810 N4BP3O15049 544 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 SGSM2O43147 1006 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 APPP05067 770 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 SSPNQ14714 243 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 LONRF2Q1L5Z9 754 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 RSPO2Q6UXX9 243 aaPredicted RBP6.86□□□□□ -1.31
COPS3-209ENST00000486810 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 RIOX2Q8IUF8 465 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 MZB1Q8WU39 189 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 TSPAN17Q96FV3 270 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 YY1AP1Q9H869 796 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 TRAF6Q9Y4K3 522 aa6.86□□□□□ -1.31
COPS3-209ENST00000486810 NPIPB6E9PJ23 425 aa6.85□□□□□ -1.31
COPS3-209ENST00000486810 H7BY64 318 aa6.85□□□□□ -1.31
COPS3-209ENST00000486810 ATF2P15336 505 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms