RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 AP5M1Q9H0R1 490 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 PCDH18Q9HCL0 1135 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 SMARCA5O60264 1052 aaPredicted RBP6.86□□□□□ -1.31
SMC4-218ENST00000486711 CYP2C8P10632 490 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
SMC4-218ENST00000486711 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 GTF2IRD2BQ6EKJ0 949 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 GTF2IRD2Q86UP8 949 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 PPP1R14AQ96A00 147 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 ZBTB8AQ96BR9 441 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 OSBPL2Q9H1P3 480 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 SIT1Q9Y3P8 196 aa6.86□□□□□ -1.31
SMC4-218ENST00000486711 K7ESM1 405 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 NOBOXO60393 691 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 THBDP07204 575 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 CCDC144BQ3MJ40 725 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 MBLAC2Q68D91 279 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 ETV3LQ6ZN32 361 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 DDX11Q96FC9 970 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 ZSWIM4Q9H7M6 989 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 CYP26B1Q9NR63 512 aa6.85□□□□□ -1.31
SMC4-218ENST00000486711 SPATA6Q9NWH7 488 aaPredicted RBP6.85□□□□□ -1.31
SMC4-218ENST00000486711 SMAD7O15105 426 aaKnown RBP6.84□□□□□ -1.31
SMC4-218ENST00000486711 C8BP07358 591 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 IQCEQ6IPM2 695 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 FERMT3Q86UX7 667 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 SEC14L1Q92503 715 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 DPF3Q92784 378 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 MRGPRX3Q96LB0 322 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 NKX2-4Q9H2Z4 354 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 ACTR10Q9NZ32 417 aa6.84□□□□□ -1.31
SMC4-218ENST00000486711 CNR2P34972 360 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
SMC4-218ENST00000486711 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
SMC4-218ENST00000486711 ZNF761Q86XN6 746 aaPredicted RBP6.83□□□□□ -1.32
SMC4-218ENST00000486711 MIB1Q86YT6 1006 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 NPLOC4Q8TAT6 608 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 HNRNPLLQ8WVV9 542 aaKnown RBP6.83□□□□□ -1.32
SMC4-218ENST00000486711 BTG4Q9NY30 223 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 SIRPGQ9P1W8 387 aa6.83□□□□□ -1.32
SMC4-218ENST00000486711 C22orf46C9J442 243 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 SLC6A11P48066 632 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
SMC4-218ENST00000486711 RAB33AQ14088 237 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 INF2Q27J81 1249 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
SMC4-218ENST00000486711 ZC3H18Q86VM9 953 aaKnown RBP6.82□□□□□ -1.32
SMC4-218ENST00000486711 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 FRS2Q8WU20 508 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 DDX1Q92499 740 aaKnown RBP6.82□□□□□ -1.32
SMC4-218ENST00000486711 MRFAP1L1Q96HT8 127 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 GORASP1Q9BQQ3 440 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 DUSP10Q9Y6W6 482 aa6.82□□□□□ -1.32
SMC4-218ENST00000486711 SGSM2O43147 1006 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 KLF4O43474 513 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 THBS2P35442 1172 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 GTF2A2P52657 109 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 BMS1Q14692 1282 aaKnown RBP6.81□□□□□ -1.32
SMC4-218ENST00000486711 ZNF827Q17R98 1081 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 MROH9Q5TGP6 573 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 GGNQ86UU5 652 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 RIOX2Q8IUF8 465 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 C11orf84Q9BUA3 381 aaPredicted RBP6.81□□□□□ -1.32
SMC4-218ENST00000486711 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
SMC4-218ENST00000486711 TIMM13Q9Y5L4 95 aaPredicted RBP6.81□□□□□ -1.32
SMC4-218ENST00000486711 MYO1BO43795 1136 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
SMC4-218ENST00000486711 KCNAB2Q13303 367 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 FXNQ16595 210 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 KRTAP5-3Q6L8H2 238 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 HHIPL2Q6UWX4 724 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 CD300LDQ6UXZ3 194 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 Q8N1Y9 231 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 TTLL6Q8N841 843 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 KYQ8NBH2 561 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 BTN2A2Q8WVV5 523 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 DIO2Q92813 273 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 MKL1Q969V6 931 aa6.8□□□□□ -1.32
SMC4-218ENST00000486711 NGRNQ9NPE2 291 aaKnown RBP6.8□□□□□ -1.32
SMC4-218ENST00000486711 MEFVO15553 781 aaPredicted RBP6.79□□□□□ -1.32
SMC4-218ENST00000486711 FPR2P25090 351 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 HOXC12P31275 282 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 CYP4F3Q08477 520 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 LARP1BQ659C4 914 aaKnown RBP6.79□□□□□ -1.32
SMC4-218ENST00000486711 C6orf15Q6UXA7 325 aaPredicted RBP6.79□□□□□ -1.32
SMC4-218ENST00000486711 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
SMC4-218ENST00000486711 LGR4Q9BXB1 951 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 CDK11AQ9UQ88 783 aaPredicted RBP6.79□□□□□ -1.32
SMC4-218ENST00000486711 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms