RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NAA15Q9BXJ9 866 aaKnown RBP13.39□□□□□ -0.27
PKP4-213ENST00000486254 MAF1Q9H063 256 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 GDAQ9Y2T3 454 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 PPP2R3BQ9Y5P8 575 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 PDE4DQ08499 809 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
PKP4-213ENST00000486254 APOBEC3FQ8IUX4 373 aaKnown RBP13.38□□□□□ -0.27
PKP4-213ENST00000486254 MICALL2Q8IY33 904 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 P2RX5Q93086 422 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 ZNF112Q9UJU3 913 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
PKP4-213ENST00000486254 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
PKP4-213ENST00000486254 A0A1W2PQC6 194 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 MARCH6O60337 910 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 ICAM1P05362 532 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 POLR2MP0CAP2 368 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 USP14P54578 494 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 STX17P56962 302 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 KRT31Q15323 416 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 TMEM139Q8IV31 216 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 C17orf53Q8N3J3 647 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 MYRIPQ8NFW9 859 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 P2RX7Q99572 595 aaKnown RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 MYMKA6NI61 221 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 RPA1P27694 616 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 LRRC63Q05C16 580 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 KIF4BQ2VIQ3 1234 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 USH1GQ495M9 461 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 TC2NQ8N9U0 490 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 WDR18Q9BV38 432 aa13.37□□□□□ -0.27
PKP4-213ENST00000486254 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
PKP4-213ENST00000486254 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 FRMD3A2A2Y4 597 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 LGALS16A8MUM7 142 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 KIF20AO95235 890 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 FGFR1OPO95684 399 aaKnown RBP13.36□□□□□ -0.27
PKP4-213ENST00000486254 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
PKP4-213ENST00000486254 HSD17B4P51659 736 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 MCM6Q14566 821 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 MIGA2Q7L4E1 593 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 KIAA0895Q8NCT3 520 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 DNAJC19Q96DA6 116 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 TRIM47Q96LD4 638 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 FEZ1Q99689 392 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
PKP4-213ENST00000486254 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
PKP4-213ENST00000486254 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 AKR1B15C9JRZ8 316 aaPredicted RBP13.35□□□□□ -0.27
PKP4-213ENST00000486254 TPM1P09493 284 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 BCRP11274 1271 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 STK4Q13043 487 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
PKP4-213ENST00000486254 PRR16Q569H4 304 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 RETREG2Q8NC44 543 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 DDX12PQ92771 950 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 C12orf42Q96LP6 360 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 PLIN2Q99541 437 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
PKP4-213ENST00000486254 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 ZNF341Q9BYN7 854 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
PKP4-213ENST00000486254 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 N4BP3O15049 544 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 MSH4O15457 936 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 ZSCAN12O43309 604 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 MFAP3LO75121 409 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 KRT26Q7Z3Y9 468 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 KCNK18Q7Z418 384 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms