RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 STXBP3O00186 592 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 NBNO60934 754 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 TBX10O75333 385 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 HTRA4P83105 476 aaPredicted RBP9.96□□□□□ -0.82
XRN1-212ENST00000486211 SIGLEC14Q08ET2 396 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 TNNI3KQ59H18 835 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 PRPF38AQ8NAV1 312 aaKnown RBP9.96□□□□□ -0.82
XRN1-212ENST00000486211 AFAP1L1Q8TED9 768 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 CCDC17Q96LX7 622 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 MTG1Q9BT17 334 aaPredicted RBP9.96□□□□□ -0.82
XRN1-212ENST00000486211 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
XRN1-212ENST00000486211 ANTXR1Q9H6X2 564 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 KANSL2Q9H9L4 492 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.82
XRN1-212ENST00000486211 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 CACNA1GO43497 2377 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 GREB1LQ9C091 1923 aaPredicted RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 TRIP12Q14669 1992 aaPredicted RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 NCOR2Q9Y618 2525 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 LOC730098B7Z3J9 87 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 MYL3P08590 195 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 PTPN11Q06124 597 aaPredicted RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 RBL2Q08999 1139 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 HYAL1Q12794 435 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 GPM6BQ13491 265 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 CBX2Q14781 532 aaPredicted RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 DUSP28Q4G0W2 176 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 FAM47CQ5HY64 1035 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 TMED8Q6PL24 325 aaPredicted RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 SDR42E1Q8WUS8 393 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 DHX38Q92620 1227 aaKnown RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 A1CFQ9NQ94 594 aaKnown RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 DBNLQ9UJU6 430 aaKnown RBP9.95□□□□□ -0.82
XRN1-212ENST00000486211 INSL6Q9Y581 213 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 LCTP09848 1927 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 MYO7AQ13402 2215 aa9.95□□□□□ -0.82
XRN1-212ENST00000486211 DNAH14Q0VDD8 3507 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 PNMA6EA0A0J9YXQ4 647 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 NCK2O43639 380 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 RAD21O60216 631 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 ZBED4O75132 1171 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 NDUFB10O96000 172 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 SELPP16109 830 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 CDK8P49336 464 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 OAZ1P54368 228 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 G3BP1Q13283 466 aaKnown RBP eCLIP9.94□□□□□ -0.82
XRN1-212ENST00000486211 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
XRN1-212ENST00000486211 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 LRRC8DQ7L1W4 858 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 ADSSL1Q8N142 457 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 CAGE1Q8TC20 777 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 MORC4Q8TE76 937 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 RMDN1Q96DB5 314 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 CRBNQ96SW2 442 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 CRNKL1Q9BZJ0 848 aaKnown RBP9.94□□□□□ -0.82
XRN1-212ENST00000486211 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
XRN1-212ENST00000486211 TLR7Q9NYK1 1049 aaKnown RBP9.94□□□□□ -0.82
XRN1-212ENST00000486211 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
XRN1-212ENST00000486211 VPS13AQ96RL7 3174 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 USP17L21D6R901 530 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 EFCAB14O75071 495 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 PDGFBP01127 241 aaPredicted RBP9.93□□□□□ -0.82
XRN1-212ENST00000486211 CPT1AP50416 773 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 PTGISQ16647 500 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 C16orf86Q6ZW13 317 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 MSLNLQ96KJ4 702 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 ACAD9Q9H845 621 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 CD207Q9UJ71 328 aa9.93□□□□□ -0.82
XRN1-212ENST00000486211 MICAL3Q7RTP6 2002 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 NLRC5Q86WI3 1866 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 CYP2D7A0A087X1C5 515 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 F5H6K3 240 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 LINC01565O15544 149 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 KDM4AO75164 1064 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
XRN1-212ENST00000486211 EYA4O95677 639 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
XRN1-212ENST00000486211 COPS2P61201 443 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 KLRC3Q07444 240 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 IKBKEQ14164 716 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 ALDH1L2Q3SY69 923 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 C12orf60Q5U649 245 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 TMEM192Q8IY95 271 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 LCORLQ8N3X6 602 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 CCDC155Q8N6L0 562 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 NKD2Q969F2 451 aaPredicted RBP9.92□□□□□ -0.82
XRN1-212ENST00000486211 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms