RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ACTN1P12814 892 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 RFC2P35250 354 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 SLC16A2P36021 539 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 CPT1AP50416 773 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 KRT32Q14532 448 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 SLC30A10Q6XR72 485 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 PHOSPHO2Q8TCD6 241 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 ARNTL2Q8WYA1 636 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 LRFN3Q9BTN0 628 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 TCP11L1Q9NUJ3 509 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 COG5Q9UP83 839 aa20.49■□□□□ 0.87
MCF2L-226ENST00000486210 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 LPXNO60711 386 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
MCF2L-226ENST00000486210 GRB10Q13322 594 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 FAM47CQ5HY64 1035 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 BTNL9Q6UXG8 535 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 HERC6Q8IVU3 1022 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 COPS5Q92905 334 aa20.48■□□□□ 0.87
MCF2L-226ENST00000486210 KHSRPQ92945 711 aaKnown RBP eCLIP20.48■□□□□ 0.87
MCF2L-226ENST00000486210 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
MCF2L-226ENST00000486210 LOC102724159A0A0B4J2E5 919 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 PRC1O43663 620 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
MCF2L-226ENST00000486210 PWP2Q15269 919 aaKnown RBP20.47■□□□□ 0.87
MCF2L-226ENST00000486210 NFRKBQ6P4R8 1299 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 CLEC4DQ8WXI8 215 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 LRRC2Q9BYS8 371 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 GPHNQ9NQX3 736 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-226ENST00000486210 PNMA2Q9UL42 364 aa20.47■□□□□ 0.87
MCF2L-226ENST00000486210 PTPDC1A2A3K4 754 aa20.46■□□□□ 0.87
MCF2L-226ENST00000486210 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
MCF2L-226ENST00000486210 NT5C2P49902 561 aa20.46■□□□□ 0.87
MCF2L-226ENST00000486210 ANAPC15P60006 121 aa20.46■□□□□ 0.87
MCF2L-226ENST00000486210 ZSCAN10Q96SZ4 725 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-226ENST00000486210 KIF2CQ99661 725 aa20.46■□□□□ 0.87
MCF2L-226ENST00000486210 SENP2Q9HC62 589 aa20.46■□□□□ 0.87
MCF2L-226ENST00000486210 A6NJR5 290 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 RBAK-RBAKDNI3L0D1 243 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 CASTP20810 708 aaKnown RBP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 EDNRBP24530 442 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 MCM5P33992 734 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 GPNMBQ14956 572 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 SEC23AQ15436 765 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 SYDE2Q5VT97 1194 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 DHX32Q7L7V1 743 aaKnown RBP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 IQCA1Q86XH1 822 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 ENAHQ8N8S7 591 aaPredicted RBP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 HLA-CQ95604 372 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 CTAGE1Q96RT6 745 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 FTOQ9C0B1 505 aaKnown RBP eCLIP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 ZSWIM6Q9HCJ5 1215 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 C11orf16Q9NQ32 467 aa20.45■□□□□ 0.86
MCF2L-226ENST00000486210 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
MCF2L-226ENST00000486210 LCHNA4D1U4 455 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 IFIT3O14879 490 aaKnown RBP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 CALML3P27482 149 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 PSMA5P28066 241 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 PTPN11Q06124 597 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 PPP2R5BQ15173 497 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 TMCO2Q7Z6W1 182 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 IGDCC4Q8TDY8 1250 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 UBAC1Q9BSL1 405 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 TM6SF1Q9BZW5 370 aa20.44■□□□□ 0.86
MCF2L-226ENST00000486210 ARIH1Q9Y4X5 557 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-226ENST00000486210 KIF28PB7ZC32 967 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 ARIH2O95376 493 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 RPS6KB1P23443 525 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 RPS6P62753 249 aaKnown RBP20.43■□□□□ 0.86
MCF2L-226ENST00000486210 RNF207Q6ZRF8 634 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 TTC14Q96N46 770 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 MPHOSPH6Q99547 160 aaKnown RBP20.43■□□□□ 0.86
MCF2L-226ENST00000486210 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
MCF2L-226ENST00000486210 SH2B2O14492 632 aaPredicted RBP20.42■□□□□ 0.86
MCF2L-226ENST00000486210 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
MCF2L-226ENST00000486210 WDR5P61964 334 aaKnown RBP20.42■□□□□ 0.86
MCF2L-226ENST00000486210 PDE4DQ08499 809 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 BFSP2Q13515 415 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 TMEM31Q5JXX7 168 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 RUFY3Q7L099 469 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 DGKHQ86XP1 1220 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 CD320Q9NPF0 282 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 BRWD1Q9NSI6 2320 aa20.42■□□□□ 0.86
MCF2L-226ENST00000486210 SIP14410 1827 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 KPNA6O60684 536 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 TXNP10599 105 aaKnown RBP20.41■□□□□ 0.86
MCF2L-226ENST00000486210 DEFB103AP81534 67 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 TCTN1Q2MV58 587 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 BRDTQ58F21 947 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms