RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TTC31Q49AM3 519 aaPredicted RBP19.48■□□□□ 0.71
TNXB-205ENST00000486148 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 SMCR8Q8TEV9 937 aaPredicted RBP19.48■□□□□ 0.71
TNXB-205ENST00000486148 CCDC42Q96M95 316 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 ARHGAP20Q9P2F6 1191 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 hCG_1984214I3L0E3 225 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 PDE2AO00408 941 aaPredicted RBP19.48■□□□□ 0.71
TNXB-205ENST00000486148 ERCC3P19447 782 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 UBE2SQ16763 222 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 TMEM266Q2M3C6 531 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 ZNF713Q8N859 430 aaPredicted RBP19.48■□□□□ 0.71
TNXB-205ENST00000486148 SNX29Q8TEQ0 813 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 RAD54LQ92698 747 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 LRRC4BQ9NT99 713 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 PLAGL2Q9UPG8 496 aa19.48■□□□□ 0.71
TNXB-205ENST00000486148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.47■□□□□ 0.71
TNXB-205ENST00000486148 IDEP14735 1019 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 MAGEA9P43362 315 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 GABPAQ06546 454 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 ASPRV1Q53RT3 343 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 DPP8Q6V1X1 898 aaPredicted RBP19.47■□□□□ 0.71
TNXB-205ENST00000486148 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 SLF2Q8IX21 1173 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 GJA10Q969M2 543 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 PLIN4Q96Q06 1357 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 PPP1R11O60927 126 aaPredicted RBP19.47■□□□□ 0.71
TNXB-205ENST00000486148 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 HNRNPH3P31942 346 aaKnown RBP19.47■□□□□ 0.71
TNXB-205ENST00000486148 TNNI2P48788 182 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 PSEN1P49768 467 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 KIF5AQ12840 1032 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 LRRC41Q15345 812 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 ECM1Q16610 540 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 GUF1Q8N442 669 aaKnown RBP19.47■□□□□ 0.71
TNXB-205ENST00000486148 DDX12PQ92771 950 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 DRC1Q96MC2 740 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 NCAPGQ9BPX3 1015 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 FAN1Q9Y2M0 1017 aa19.47■□□□□ 0.71
TNXB-205ENST00000486148 FOCADQ5VW36 1801 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 RBM17Q96I25 401 aaKnown RBP19.46■□□□□ 0.71
TNXB-205ENST00000486148 MMRN2Q9H8L6 949 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 DDX4Q9NQI0 724 aaKnown RBP19.46■□□□□ 0.71
TNXB-205ENST00000486148 IGKV6D-41A0A0C4DH26 115 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 GTF2IP78347 998 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 ATP2B2Q01814 1243 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 PDIA5Q14554 519 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 SPA17Q15506 151 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 MAN2A1Q16706 1144 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 CCDC96Q2M329 555 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 LRRC55Q6ZSA7 311 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 TBC1D22AQ8WUA7 517 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 JMJD4Q9H9V9 463 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 JADE2Q9NQC1 790 aa19.46■□□□□ 0.71
TNXB-205ENST00000486148 C6orf229H3BNL8 230 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 ZMYND10O75800 440 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 SERPINB2P05120 415 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 CKAP4Q07065 602 aaKnown RBP19.45■□□□□ 0.7
TNXB-205ENST00000486148 EHHADHQ08426 723 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 TMEM119Q4V9L6 283 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 KRT79Q5XKE5 535 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 TTBK2Q6IQ55 1244 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 LEKR1Q6ZMV7 388 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 ADGRF4Q8IZF3 695 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 CAPN6Q9Y6Q1 641 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
TNXB-205ENST00000486148 GYS1P13807 737 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 EIF4A3P38919 411 aaKnown RBP19.45■□□□□ 0.7
TNXB-205ENST00000486148 CAGE1Q8TC20 777 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 CCDC102AQ96A19 550 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 MYCBPQ99417 103 aaPredicted RBP19.45■□□□□ 0.7
TNXB-205ENST00000486148 MLXIPQ9HAP2 919 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 PCDHA13Q9Y5I0 950 aa19.45■□□□□ 0.7
TNXB-205ENST00000486148 LRRC53A6NM62 1247 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 KIF11P52732 1056 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 CCDC155Q8N6L0 562 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 HAS1Q92839 578 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 IFIH1Q9BYX4 1025 aaKnown RBP19.44■□□□□ 0.7
TNXB-205ENST00000486148 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 RIC8AQ9NPQ8 531 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 ANKRD65E5RJM6 399 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 IVLP07476 585 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 LRRC63Q05C16 580 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 ZNF543Q08ER8 600 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
TNXB-205ENST00000486148 IQCDQ96DY2 449 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 RPGRIP1Q96KN7 1286 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 TSGA10Q9BZW7 698 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
TNXB-205ENST00000486148 PNMA6FA0A0J9YX94 578 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 PHACTR2O75167 634 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 C2orf54Q08AI8 447 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 RRAGAQ7L523 313 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 SH2D4AQ9H788 454 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 BBOX1O75936 387 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 SLC16A2P36021 539 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 CLK2P49760 499 aaKnown RBP19.43■□□□□ 0.7
TNXB-205ENST00000486148 BAP1Q92560 729 aa19.43■□□□□ 0.7
TNXB-205ENST00000486148 USP21Q9UK80 565 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms