RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 VSIG10LQ86VR7 867 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 FAM126BQ8IXS8 530 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 IL31RAQ8NI17 732 aa22.58■■□□□ 1.21
SNX5-213ENST00000486039 COL6A3P12111 3177 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 A6NJR5 290 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 ZBTB43O43298 467 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 RGS20O76081 388 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 RAG1P15918 1043 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 PURAQ00577 322 aaKnown RBP22.57■■□□□ 1.2
SNX5-213ENST00000486039 POLR3EQ9NVU0 708 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 RBM28Q9NW13 759 aaKnown RBP22.57■■□□□ 1.2
SNX5-213ENST00000486039 DDX41Q9UJV9 622 aaKnown RBP22.57■■□□□ 1.2
SNX5-213ENST00000486039 TBX21Q9UL17 535 aa22.57■■□□□ 1.2
SNX5-213ENST00000486039 KLF18A0A0U1RQI7 1052 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 EPB41L2O43491 1005 aaKnown RBP22.56■■□□□ 1.2
SNX5-213ENST00000486039 CD4P01730 458 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 MYL3P08590 195 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 USP17L6PQ6QN14 398 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 Q6ZUG5 572 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 ZFP91Q96JP5 570 aaPredicted RBP22.56■■□□□ 1.2
SNX5-213ENST00000486039 USP26Q9BXU7 913 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 FAM217BQ9NTX9 383 aaPredicted RBP22.56■■□□□ 1.2
SNX5-213ENST00000486039 CNTNAP5Q8WYK1 1306 aa22.56■■□□□ 1.2
SNX5-213ENST00000486039 MEIS2O14770 477 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 GH1P01241 217 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 ARHGAP1Q07960 439 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 FUT2Q10981 343 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 RTN1Q16799 776 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 BLOC1S2Q6QNY1 142 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 MRVI1Q9Y6F6 885 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 FRMPD4Q14CM0 1322 aa22.55■■□□□ 1.2
SNX5-213ENST00000486039 GOLGA8AA7E2F4 631 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 GOLGA8BA8MQT2 603 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 PIK3CDO00329 1044 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 RPS6KB1P23443 525 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 CDC27P30260 824 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 CCND2P30279 289 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 FGD1P98174 961 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 APOBRQ0VD83 1088 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
SNX5-213ENST00000486039 ZNF697Q5TEC3 545 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 AFG1LQ8WV93 481 aa22.54■■□□□ 1.2
SNX5-213ENST00000486039 TLR3O15455 904 aaKnown RBP22.53■■□□□ 1.2
SNX5-213ENST00000486039 TIMP1P01033 207 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 RCAN1P53805 252 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 EPHB4P54760 987 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 FPGSQ05932 587 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 FBXL16Q8N461 479 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 SMARCC2Q8TAQ2 1214 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 BRF1Q92994 677 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 FAM161BQ96MY7 647 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 GUCD1Q96NT3 240 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 MTG1Q9BT17 334 aaPredicted RBP22.53■■□□□ 1.2
SNX5-213ENST00000486039 SEZ6LQ9BYH1 1024 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 KIAA1217Q5T5P2 1943 aa22.53■■□□□ 1.2
SNX5-213ENST00000486039 LAMA2P24043 3122 aaKnown RBP22.52■■□□□ 1.2
SNX5-213ENST00000486039 MMP3P08254 477 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 CASTP20810 708 aaKnown RBP22.52■■□□□ 1.2
SNX5-213ENST00000486039 PSMA5P28066 241 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 MRPS9P82933 396 aaKnown RBP22.52■■□□□ 1.2
SNX5-213ENST00000486039 SMAD3P84022 425 aaKnown RBP22.52■■□□□ 1.2
SNX5-213ENST00000486039 GPKOWQ92917 476 aaPredicted RBP eCLIP22.52■■□□□ 1.2
SNX5-213ENST00000486039 CUL5Q93034 780 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 AGXT2Q9BYV1 514 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 TRPV6Q9H1D0 765 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 PSTPIP2Q9H939 334 aa22.52■■□□□ 1.2
SNX5-213ENST00000486039 B4GALT4O60513 344 aa22.51■■□□□ 1.19
SNX5-213ENST00000486039 KPNA6O60684 536 aa22.51■■□□□ 1.19
SNX5-213ENST00000486039 ADD1P35611 737 aaKnown RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 SP2Q02086 613 aa22.51■■□□□ 1.19
SNX5-213ENST00000486039 WWC2Q6AWC2 1192 aa22.51■■□□□ 1.19
SNX5-213ENST00000486039 HEATR3Q7Z4Q2 680 aa22.51■■□□□ 1.19
SNX5-213ENST00000486039 EMID1Q96A84 441 aaPredicted RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 RNPC3Q96LT9 517 aaKnown RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 ALDH8A1Q9H2A2 487 aaPredicted RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 V9GY48 417 aaPredicted RBP22.51■■□□□ 1.19
SNX5-213ENST00000486039 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNX5-213ENST00000486039 NBPF20Q3BBV1 942 aa22.5■■□□□ 1.19
SNX5-213ENST00000486039 TYW1BQ6NUM6 668 aa22.5■■□□□ 1.19
SNX5-213ENST00000486039 KCNV1Q6PIU1 500 aa22.5■■□□□ 1.19
SNX5-213ENST00000486039 PPP1R13LQ8WUF5 828 aa22.5■■□□□ 1.19
SNX5-213ENST00000486039 LAMC2Q13753 1193 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 UBE2SQ16763 222 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 MYSM1Q5VVJ2 828 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 MFSD5Q6N075 450 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 DHX37Q8IY37 1157 aaKnown RBP22.49■■□□□ 1.19
SNX5-213ENST00000486039 INPP4AQ96PE3 977 aaPredicted RBP22.49■■□□□ 1.19
SNX5-213ENST00000486039 PPP1R12CQ9BZL4 782 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 ZSWIM6Q9HCJ5 1215 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 RTEL1Q9NZ71 1219 aa22.49■■□□□ 1.19
SNX5-213ENST00000486039 SORBS3O60504 671 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 STAM2O75886 525 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 TGFB3P10600 412 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 UBA1P22314 1058 aaKnown RBP22.48■■□□□ 1.19
SNX5-213ENST00000486039 CELF3Q5SZQ8 465 aaKnown RBP22.48■■□□□ 1.19
SNX5-213ENST00000486039 PCNX4Q63HM2 1172 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 RUFY3Q7L099 469 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 PPTC7Q8NI37 304 aa22.48■■□□□ 1.19
SNX5-213ENST00000486039 KAT2BQ92831 832 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms