RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 STX1BP61266 288 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 NFX1Q12986 1120 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 THOC5Q13769 683 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TTC25Q96NG3 672 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 MYL3P08590 195 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 ARHGAP25P42331 645 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 LRRC24Q50LG9 513 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 TESK2Q96S53 571 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 BUB1BO60566 1050 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PPFIA2O75334 1257 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 FGAP02671 866 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 INHBAP08476 426 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PHKA1P46020 1223 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 KPNA2P52292 529 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 MTERF2Q49AM1 385 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 RNF10Q8N5U6 811 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 A0A1B0GUA9 196 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 MAP3K7O43318 606 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 DONSONQ9NYP3 566 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 CASP2P42575 452 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 COG7P83436 770 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 PTGDRQ13258 359 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 OGFRQ9NZT2 677 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 KIAA0232Q92628 1395 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 THEM5Q8N1Q8 247 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 LRGUKQ96M69 825 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 MOSPD1Q9UJG1 213 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
SRGAP3-207ENST00000485983 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 SGK1O00141 431 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 ARL13BQ3SXY8 428 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 SLC13A4Q9UKG4 626 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 INPP1P49441 399 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 LARP4BQ92615 738 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 BUB1O43683 1085 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 TRAPPC10P48553 1259 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 CATSPER4Q7RTX7 472 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 N4BP2L2Q92802 583 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 AK8Q96MA6 479 aa11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 OLA1Q9NTK5 396 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-207ENST00000485983 PFKFB2O60825 505 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 SEC24BO95487 1268 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ATP6V1E1P36543 226 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8FQ08AF8 430 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8DPQ0D2H9 430 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MESDQ14696 234 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 NUDCD1Q96RS6 583 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ZBTB1Q9Y2K1 713 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MCF2LO15068 1137 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 CIAO1O76071 339 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 NR2F2P24468 414 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 PPARDQ03181 441 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 WHAMMP3Q1A5X7 153 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 TMCO4Q5TGY1 634 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 DPH5Q9H2P9 285 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 PLEKHA4Q9H4M7 779 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 KCNQ3O43525 872 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 HSPA8P11142 646 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 CMA1P23946 247 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MAPK4P31152 587 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MASTLQ96GX5 879 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MMTAG2Q9BU76 263 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 TLK1Q9UKI8 766 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 ADAT2Q7Z6V5 191 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 SSH3Q8TE77 659 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms