RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 RPGRIP1Q96KN7 1286 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 NEUROD6Q96NK8 337 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 AIFM3Q96NN9 605 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CLIC6Q96NY7 704 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 NAPGQ99747 312 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 PLA2G12BQ9BX93 195 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.29□□□□□ -1.564e-23■□□□□ 8.3
SMARCC1-206ENST00000485737 FAM107BQ9H098 131 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 LY9Q9HBG7 655 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ABCB6Q9NP58 842 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 GJB4Q9NTQ9 266 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 AATFQ9NY61 560 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 VPS18Q9P253 973 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 WWC3Q9ULE0 1092 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 MKL2Q9ULH7 1088 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CEP131Q9UPN4 1083 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 FAN1Q9Y2M0 1017 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SRPRBQ9Y5M8 271 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TNS3Q68CZ2 1445 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 PSMD14O00487 310 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PTCD1O75127 700 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PPFIA4O75335 1185 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PRPF6O94906 941 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 BMP15O95972 392 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 GYPCP04921 128 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 ADD2P35612 726 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 IARSP41252 1262 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 TOB1P50616 345 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 USP14P54578 494 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 TIMM10P62072 90 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 RBL2Q08999 1139 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 MTF1Q14872 753 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 UBE3CQ15386 1083 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 SAFBQ15424 915 aaKnown RBP eCLIP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 HIF1AQ16665 826 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 TTC31Q49AM3 519 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 MAP9Q49MG5 647 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 FILIP1LQ4L180 1135 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 LRRC24Q50LG9 513 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 HSP90B2PQ58FF3 399 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 XP32Q5T750 250 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 SLC9C2Q5TAH2 1124 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 ISM2Q6H9L7 571 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 POTEAQ6S8J7 498 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 CYB5R4Q7L1T6 521 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 TRAPPC11Q7Z392 1133 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PPFIBP1Q86W92 1011 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 SUGP1Q8IWZ8 645 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 EFCAB13Q8IY85 973 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 DIS3L2Q8IYB7 885 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 FAM177A1Q8N128 213 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 SLC35F6Q8N357 371 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 IGDCC4Q8TDY8 1250 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PPM1EQ8WY54 764 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 BTBD6Q96KE9 485 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 ISCA1Q9BUE6 129 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 PUS7LQ9H0K6 701 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 AVENQ9NQS1 362 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 SAMSN1Q9NSI8 373 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 ABHD10Q9NUJ1 306 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 LIMA1Q9UHB6 759 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 KLF15Q9UIH9 416 aa5.28□□□□□ -1.56
SMARCC1-206ENST00000485737 DOCK2Q92608 1830 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 C1orf167Q5SNV9 1468 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 EIF3CLB5ME19 914 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 POLR2DO15514 142 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 TEX33O43247 280 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 CLSTN1O94985 981 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 DEXIO95424 95 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 ADORA1P30542 326 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 TNNT3P45378 269 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 PIP4K2AP48426 406 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 GYS2P54840 703 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 EIF5P55010 431 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 ERVK-24P63145 666 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 IRX3P78415 501 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 CKAP4Q07065 602 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 SSRP1Q08945 709 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 TBC1D8BQ0IIM8 1120 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 SPEM2Q0P670 501 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 TRIM28Q13263 835 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 RTN1Q16799 776 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF827Q17R98 1081 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 KIF4BQ2VIQ3 1234 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF569Q5MCW4 686 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 LRRC31Q6UY01 552 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 CYP26C1Q6V0L0 522 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 CHSY3Q70JA7 882 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF572Q7Z3I7 529 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 BTLAQ7Z6A9 289 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 MICU3Q86XE3 530 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 C10orf67Q8IYJ2 551 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 NOA1Q8NC60 698 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 AFAP1L1Q8TED9 768 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 PHKBQ93100 1093 aa5.27□□□□□ -1.57
SMARCC1-206ENST00000485737 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms