RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 CNKSR3Q6P9H4 555 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 LRRC8DQ7L1W4 858 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 HLA-CQ95604 372 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 PRRC2BQ5JSZ5 2229 aaKnown RBP16.06■□□□□ 0.16
SMARCD3-211ENST00000485592 DHX16O60231 1041 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 ARHGEF15O94989 841 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 GRB10Q13322 594 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 HDAC1Q13547 482 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 ADGRF4Q8IZF3 695 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 SYTL5Q8TDW5 730 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
SMARCD3-211ENST00000485592 EFCAB14O75071 495 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 PLA2G5P39877 138 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 RBL2Q08999 1139 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 FBXO11Q86XK2 927 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 KAT2BQ92831 832 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 COL20A1Q9P218 1284 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
SMARCD3-211ENST00000485592 REV3LO60673 3130 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 ABHD14A-ACY1A0A1B0GW23 586 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 KDM4AO75164 1064 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 CKBP12277 381 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 SDSP20132 328 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 PSEN2P49810 448 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 DEFB103AP81534 67 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 DHX38Q92620 1227 aaKnown RBP16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 EMID1Q96A84 441 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 CTAGE1Q96RT6 745 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
SMARCD3-211ENST00000485592 LCHNA4D1U4 455 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 CFBP00751 764 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 CXCL10P02778 98 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 PARP1P09874 1014 aaKnown RBP16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 PTK7Q13308 1070 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 LAMC2Q13753 1193 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 MFSD10Q14728 455 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 PPTC7Q8NI37 304 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 GDPD5Q8WTR4 605 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 RAD9AQ99638 391 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 PXMP2Q9NR77 195 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 SIP14410 1827 aa16.02■□□□□ 0.16
SMARCD3-211ENST00000485592 B4E1Z4 1266 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 LPXNO60711 386 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 NBNO60934 754 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 GJB5O95377 273 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 F2P00734 622 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 NR3C2P08235 984 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 ZNF286BP0CG31 522 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 IKBKEQ14164 716 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 GPNMBQ14956 572 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 IMMTQ16891 758 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 KIAA0753Q2KHM9 967 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 SPRED2Q7Z698 418 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 TMCO2Q7Z6W1 182 aaPredicted RBP16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 TRANK1O15050 2925 aa16.01■□□□□ 0.15
SMARCD3-211ENST00000485592 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 HIP1O00291 1037 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 KCNV1Q6PIU1 500 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 CWC27Q6UX04 472 aaKnown RBP16■□□□□ 0.15
SMARCD3-211ENST00000485592 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
SMARCD3-211ENST00000485592 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 AMNQ9BXJ7 453 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 KRT23Q9C075 422 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 JMJD4Q9H9V9 463 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 MTUS1Q9ULD2 1270 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 HCN4Q9Y3Q4 1203 aa16■□□□□ 0.15
SMARCD3-211ENST00000485592 EMSYQ7Z589 1322 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 HAS3O00219 553 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 HSD17B4P51659 736 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 ERVK-21P61565 698 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 ZNF618Q5T7W0 954 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 DSCC1Q9BVC3 393 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
SMARCD3-211ENST00000485592 MAP3K20Q9NYL2 800 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms