RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 NKX3-2P78367 333 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 GRM4Q14833 912 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 ANO2Q9NQ90 1003 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 TMEM39AQ9NV64 488 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
DDX56-212ENST00000485367 B4DLN1 442 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
DDX56-212ENST00000485367 ANTXR2P58335 489 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
DDX56-212ENST00000485367 DNERQ8NFT8 737 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 SYTL5Q8TDW5 730 aaPredicted RBP12.29□□□□□ -0.44
DDX56-212ENST00000485367 TOX2Q96NM4 488 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 TMEM51Q9NW97 253 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 Q9Y3F1 56 aa12.29□□□□□ -0.44
DDX56-212ENST00000485367 KIAA0355O15063 1070 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ZEB2O60315 1214 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 RAG1P15918 1043 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 FAAP100Q0VG06 881 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 HOMER1Q86YM7 354 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ZNF710Q8N1W2 664 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 TAAR1Q96RJ0 339 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
DDX56-212ENST00000485367 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 SZT2Q5T011 3432 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 RBM47A0AV96 593 aaKnown RBP12.28□□□□□ -0.44
DDX56-212ENST00000485367 GOLGA6L6A8MZA4 724 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ARVCFO00192 962 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 SLC27A2O14975 620 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ZBTB5O15062 677 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 PRC1O43663 620 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 PPP1R11O60927 126 aaPredicted RBP12.28□□□□□ -0.44
DDX56-212ENST00000485367 CFBP00751 764 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 EDNRBP24530 442 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 ITGB8P26012 769 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 CDK7P50613 346 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 UBE2HP62256 183 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 TROAPQ12815 778 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 SYCP1Q15431 976 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 CREB3L3Q68CJ9 461 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 PIGSQ96S52 555 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 MAF1Q9H063 256 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 MROH7Q68CQ1 1323 aa12.28□□□□□ -0.44
DDX56-212ENST00000485367 CABYRO75952 493 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 ADCY5O95622 1261 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 SLC35G1Q2M3R5 365 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 OR6J1Q8NGC5 347 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 NSUN6Q8TEA1 469 aaKnown RBP12.27□□□□□ -0.45
DDX56-212ENST00000485367 SCFD2Q8WU76 684 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 RMDN3Q96TC7 470 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 LY9Q9HBG7 655 aa12.27□□□□□ -0.45
DDX56-212ENST00000485367 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
DDX56-212ENST00000485367 TXNP10599 105 aaKnown RBP12.26□□□□□ -0.45
DDX56-212ENST00000485367 SHHQ15465 462 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 ARHGEF16Q5VV41 709 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 MYL10Q9BUA6 226 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 RIOX1Q9H6W3 641 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
DDX56-212ENST00000485367 OPLAHO14841 1288 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 CYTH3O43739 400 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 MYL3P08590 195 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 EIF2AK2P19525 551 aaKnown RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 CPT1AP50416 773 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 PSMC6P62333 389 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 TRAF1Q13077 416 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 ITGA7Q13683 1181 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 TTLL4Q14679 1199 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 SEPT14Q6ZU15 432 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 FAM126BQ8IXS8 530 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 CTCFLQ8NI51 663 aaPredicted RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 ANKRD7Q92527 254 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 COPS5Q92905 334 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 TBX21Q9UL17 535 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 CCDC69A6NI79 296 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 NKRFO15226 690 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDX56-212ENST00000485367 CTIFO43310 598 aaKnown RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 DDAH1O94760 285 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 TIMP1P01033 207 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms