RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 GLT1D1Q96MS3 346 aa18.66■□□□□ 0.58
DDR1-246ENST00000485023 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 PQBP1O60828 265 aaKnown RBP18.65■□□□□ 0.58
DDR1-246ENST00000485023 DTNBO60941 627 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 MYL3P08590 195 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 SCG2P13521 617 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 ADCY7P51828 1080 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 NTRK3Q16288 839 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 PFKFB3Q16875 520 aaPredicted RBP18.65■□□□□ 0.58
DDR1-246ENST00000485023 PPP1R18Q6NYC8 613 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 VSIG10LQ86VR7 867 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
DDR1-246ENST00000485023 BARHL2Q9NY43 387 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 TPCN1Q9ULQ1 816 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 Q9Y3F1 56 aa18.65■□□□□ 0.58
DDR1-246ENST00000485023 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 CPLX1O14810 134 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 RGS20O76081 388 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 ZNF274Q96GC6 653 aaPredicted RBP18.64■□□□□ 0.57
DDR1-246ENST00000485023 TMEM260Q9NX78 707 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
DDR1-246ENST00000485023 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDR1-246ENST00000485023 PRPF3O43395 683 aaKnown RBP18.63■□□□□ 0.57
DDR1-246ENST00000485023 ZEB2O60315 1214 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 GH1P01241 217 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 IFNAR1P17181 557 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 CPT1AP50416 773 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 NEK4P51957 841 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 PSMC6P62333 389 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 NKX3-2P78367 333 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 MRPS9P82933 396 aaKnown RBP18.63■□□□□ 0.57
DDR1-246ENST00000485023 TLE2Q04725 743 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 SNX17Q15036 470 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 PKN1Q16512 942 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
DDR1-246ENST00000485023 RNF26Q9BY78 433 aaPredicted RBP18.63■□□□□ 0.57
DDR1-246ENST00000485023 RIC8AQ9NPQ8 531 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
DDR1-246ENST00000485023 PCDHA6Q9UN73 950 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 PCDHA8Q9Y5H6 950 aa18.63■□□□□ 0.57
DDR1-246ENST00000485023 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
DDR1-246ENST00000485023 ARHGAP1Q07960 439 aa18.62■□□□□ 0.57
DDR1-246ENST00000485023 SCRN1Q12765 414 aa18.62■□□□□ 0.57
DDR1-246ENST00000485023 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
DDR1-246ENST00000485023 AFG1LQ8WV93 481 aa18.62■□□□□ 0.57
DDR1-246ENST00000485023 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
DDR1-246ENST00000485023 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
DDR1-246ENST00000485023 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
DDR1-246ENST00000485023 ADAMTS3O15072 1205 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 LARGE1O95461 756 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 SSRP1Q08945 709 aaKnown RBP18.61■□□□□ 0.57
DDR1-246ENST00000485023 ANKRD1Q15327 319 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 GNPTABQ3T906 1256 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 TRIM22Q8IYM9 498 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 IL17RAQ96F46 866 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 VPS54Q9P1Q0 977 aa18.61■□□□□ 0.57
DDR1-246ENST00000485023 ELP1O95163 1332 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 GGPS1O95749 300 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 UBA1P22314 1058 aaKnown RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 JAKMIP3Q5VZ66 844 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 CPLX2Q6PUV4 134 aaKnown RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 SH3RF1Q7Z6J0 888 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 DHX37Q8IY37 1157 aaKnown RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 NECAB1Q8N987 351 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 ALDH8A1Q9H2A2 487 aaPredicted RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 PDLIM7Q9NR12 457 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 COLQQ9Y215 455 aaPredicted RBP18.6■□□□□ 0.57
DDR1-246ENST00000485023 KIAA1217Q5T5P2 1943 aa18.6■□□□□ 0.57
DDR1-246ENST00000485023 A6NJR5 290 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 PFKFB2O60825 505 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 MMP3P08254 477 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
DDR1-246ENST00000485023 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
DDR1-246ENST00000485023 SP2Q02086 613 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 C1orf53Q5VUE5 145 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
DDR1-246ENST00000485023 AIFM3Q96NN9 605 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 INPP4AQ96PE3 977 aaPredicted RBP18.59■□□□□ 0.57
DDR1-246ENST00000485023 EHMT1Q9H9B1 1298 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 C6orf50Q9HD87 102 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 PKD2L1Q9P0L9 805 aa18.59■□□□□ 0.57
DDR1-246ENST00000485023 GRIN2DO15399 1336 aa18.58■□□□□ 0.57
DDR1-246ENST00000485023 ARVCFO00192 962 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 FIBPO43427 364 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 STAM2O75886 525 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 CABYRO75952 493 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 CLTBP09497 229 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 MAGEA10P43363 369 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms