RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 DHX38Q92620 1227 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TCP11L1Q9NUJ3 509 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 LINC01553A4QN01 128 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 NBNO60934 754 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 IL9P15248 144 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 ERVK-21P61565 698 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RPS6P62753 249 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 BTNL9Q6UXG8 535 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 LRRC8DQ7L1W4 858 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 AFAP1L1Q8TED9 768 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TGS1Q96RS0 853 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RAD9AQ99638 391 aa17.97■□□□□ 0.47
HLA-DQB1-208ENST00000484729 GJB5O95377 273 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PDHBP11177 359 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SELPP16109 830 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SDSP20132 328 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 EDNRBP24530 442 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 LEXMQ3ZCV2 418 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CNKSR3Q6P9H4 555 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CHD1LQ86WJ1 897 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CCDC155Q8N6L0 562 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CAGE1Q8TC20 777 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 AFG1LQ8WV93 481 aa17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RNF41Q9H4P4 317 aaPredicted RBP17.96■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PTCRAQ6ISU1 281 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-208ENST00000484729 DIAPH3Q9NSV4 1193 aa17.95■□□□□ 0.46
HLA-DQB1-208ENST00000484729 NEDD4P46934 1319 aa17.95■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CXCL10P02778 98 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 MMP3P08254 477 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CKBP12277 381 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 MRE11P49959 708 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 NUCB1Q02818 461 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ZNF543Q08ER8 600 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 LY6KQ17RY6 165 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CWC27Q6UX04 472 aaKnown RBP17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ESR2Q92731 530 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 KAT2BQ92831 832 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 TTC14Q96N46 770 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 C17orf80Q9BSJ5 609 aa17.94■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ABHD14A-ACY1A0A1B0GW23 586 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ZNF213O14771 459 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 IGHDP01880 384 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CCDC62Q6P9F0 684 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 SESTD1Q86VW0 696 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 DNERQ8NFT8 737 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 MPHOSPH6Q99547 160 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 PNMA2Q9UL42 364 aa17.93■□□□□ 0.46
HLA-DQB1-208ENST00000484729 GRXCR2A6NFK2 248 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 H3BQ06 376 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ALADP13716 330 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ARHGAP1Q07960 439 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CSPP1Q1MSJ5 1256 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 SEPT14Q6ZU15 432 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 FBXO22Q8NEZ5 403 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 WNT8BQ93098 351 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ALG1Q9BT22 464 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 OSBPL3Q9H4L5 887 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 HDAC6Q9UBN7 1215 aa17.92■□□□□ 0.46
HLA-DQB1-208ENST00000484729 SIP14410 1827 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 GOLGA8HP0CJ92 632 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 RBL2Q08999 1139 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 IKBKEQ14164 716 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 MBTPS1Q14703 1052 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 USH1GQ495M9 461 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 TBC1D5Q92609 795 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 GTF2IRD1Q9UHL9 959 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
HLA-DQB1-208ENST00000484729 HIP1O00291 1037 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 KDM4AO75164 1064 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 GH1P01241 217 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ZNF200P98182 395 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 NHLH1Q02575 133 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 ZNF618Q5T7W0 954 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 TRAF7Q6Q0C0 670 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 FBXL18Q96ME1 805 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 CPVLQ9H3G5 476 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 WDFY4Q6ZS81 3184 aa17.9■□□□□ 0.46
HLA-DQB1-208ENST00000484729 B4DLN1 442 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 B4E1Z4 1266 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PARNO95453 639 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 CASTP20810 708 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PSEN2P49810 448 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 TRIM71Q2Q1W2 868 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 CCDC178Q5BJE1 867 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 EP400NLQ6ZTU2 488 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PNMA1Q8ND90 353 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms