RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 CD4P01730 458 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 ITGB8P26012 769 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 PGM5Q15124 567 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 C9orf50Q5SZB4 431 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 ZNF697Q5TEC3 545 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 CCDC62Q6P9F0 684 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 PSRC1Q6PGN9 363 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 COPS5Q92905 334 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 KATNAL1Q9BW62 490 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 LRRC2Q9BYS8 371 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.16
LDLRAP1-205ENST00000484476 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 ZBTB43O43298 467 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 PTGS1P23219 599 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 PSMA5P28066 241 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 CYP2C18P33260 490 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 FAM109BQ6ICB4 259 aaPredicted RBP16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 XRRA1Q6P2D8 792 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
LDLRAP1-205ENST00000484476 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 SPDYE3A6NKU9 549 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 OPLAHO14841 1288 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 B4GALT4O60513 344 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 FGBP02675 491 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 CSF2RAP15509 400 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 RXRAP19793 462 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 SMAD3P84022 425 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 BFSP2Q13515 415 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 RTN1Q16799 776 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 NLRX1Q86UT6 975 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 EMID1Q96A84 441 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
LDLRAP1-205ENST00000484476 GRIN2DO15399 1336 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 ARIH2O95376 493 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 MMP3P08254 477 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 NEDD9Q14511 834 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 ERICH6BQ5W0A0 696 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 GIMAP8Q8ND71 665 aaPredicted RBP16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 PPTC7Q8NI37 304 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 IL23AQ9NPF7 189 aa16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
LDLRAP1-205ENST00000484476 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 GGPS1O95749 300 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 CCL23P55773 120 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 EXOSC10Q01780 885 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 PTGISQ16647 500 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 CELF3Q5SZQ8 465 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 TMTC3Q6ZXV5 915 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 NOC4LQ9BVI4 516 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
LDLRAP1-205ENST00000484476 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 GOLGA8AA7E2F4 631 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 GOLGA8BA8MQT2 603 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 EIF5BO60841 1220 aaKnown RBP16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 PFKMP08237 780 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 ACRP10323 421 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 ACTN1P12814 892 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 EPHB4P54760 987 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 AKAP17AQ02040 695 aaKnown RBP16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 MYSM1Q5VVJ2 828 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 ZNF365Q70YC5 407 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 Q7L0L9 218 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.03■□□□□ 0.166e-8■■■■■ 30.6
LDLRAP1-205ENST00000484476 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
LDLRAP1-205ENST00000484476 FIBPO43427 364 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 CYP2C9P11712 490 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 HSPA4P34932 840 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 RFC2P35250 354 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 RCAN1P53805 252 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 NAPAP54920 295 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
LDLRAP1-205ENST00000484476 TCEANC2Q96MN5 208 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms