RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PRDM1O75626 825 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 TSPY3P0CV98 308 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 TSPY8P0CW00 308 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-207ENST00000483969 NT5C2P49902 561 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 TFAP4Q01664 338 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ATP2B2Q01814 1243 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ICA1Q05084 483 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 KIF22Q14807 665 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
COL8A1-207ENST00000483969 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 C12orf42Q96LP6 360 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 DOCK2Q92608 1830 aa10.53□□□□□ -0.72
COL8A1-207ENST00000483969 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
COL8A1-207ENST00000483969 TSPY2A6NKD2 308 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L15C9J2P7 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L13C9JLJ4 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L11C9JVI0 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L18D6R9N7 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L22D6RA61 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L17D6RBQ6 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L19D6RCP7 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L20D6RJB6 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 SGSM2O43147 1006 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 ORC4O43929 436 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 FGRP09769 529 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
COL8A1-207ENST00000483969 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-207ENST00000483969 USP17L24Q0WX57 530 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 ZYXQ15942 572 aaKnown RBP10.52□□□□□ -0.73
COL8A1-207ENST00000483969 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 C17orf99Q6UX52 265 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 SMCR8Q8TEV9 937 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-207ENST00000483969 LPAR1Q92633 364 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 TOMM22Q9NS69 142 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 NYAP2Q9P242 653 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 KIAA1024Q9UPX6 916 aa10.52□□□□□ -0.73
COL8A1-207ENST00000483969 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 A0A1W2PRG0 241 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 CDC45O75419 566 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 CYP2C8P10632 490 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 GATA4P43694 442 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 HAND2P61296 217 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 SPEM2Q0P670 501 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 SH3PXD2AQ5TCZ1 1133 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 MKL1Q969V6 931 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 ASCC2Q9H1I8 757 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 TSPAN10Q9H1Z9 355 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 HOXC10Q9NYD6 342 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 CLIP2Q9UDT6 1046 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 CPA4Q9UI42 421 aa10.51□□□□□ -0.73
COL8A1-207ENST00000483969 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL8A1-207ENST00000483969 IGKV6D-41A0A0C4DH26 115 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 ATP9BO43861 1147 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 TTLL1O95922 423 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 CLDN10P78369 228 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 SFSWAPQ12872 951 aaKnown RBP10.5□□□□□ -0.73
COL8A1-207ENST00000483969 PKN2Q16513 984 aaKnown RBP10.5□□□□□ -0.73
COL8A1-207ENST00000483969 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
COL8A1-207ENST00000483969 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 CTU1Q7Z7A3 348 aaKnown RBP10.5□□□□□ -0.73
COL8A1-207ENST00000483969 Q8N3U1 123 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 STAG1Q8WVM7 1258 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 ESR2Q92731 530 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 UCN2Q96RP3 112 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
COL8A1-207ENST00000483969 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 INCENPQ9NQS7 918 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 SYNPO2Q9UMS6 1093 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 CEP350Q5VT06 3117 aa10.5□□□□□ -0.73
COL8A1-207ENST00000483969 PALM3A6NDB9 673 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-207ENST00000483969 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 F5H6K3 240 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 M0R082 166 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 VCAM1P19320 739 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 HOXD10P28358 340 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 PTH1RQ03431 593 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 KLRC3Q07444 240 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 TRDNQ13061 729 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 DGKZQ13574 1117 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 COG2Q14746 738 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms