RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 EARS2Q5JPH6 523 aaKnown RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 NT5DC1Q5TFE4 455 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 TYW1BQ6NUM6 668 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 KRBA2Q6ZNG9 492 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 ADGRF4Q8IZF3 695 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 MICALL1Q8N3F8 863 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 HOOK2Q96ED9 719 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 PIGSQ96S52 555 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 NAP1L4Q99733 375 aaKnown RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 BPIFA3Q9BQP9 254 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 SH2D4AQ9H788 454 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 JMJD4Q9H9V9 463 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 PCDHAC2Q9Y5I4 1007 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 MRVI1Q9Y6F6 885 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 GREB1LQ9C091 1923 aaPredicted RBP6.15□□□□□ -1.43
COL17A1-206ENST00000483876 MED19A0JLT2 244 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 TCP10L2B9ZVM9 353 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 TNPO2O14787 897 aaKnown RBP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 MYL1P05976 194 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 CAP2P40123 477 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 SARSP49591 514 aaKnown RBP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 ZNF165P49910 485 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 USP11P51784 963 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PTPN5P54829 565 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 NAPAP54920 295 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 ICA1Q05084 483 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PTGDRQ13258 359 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 SNAPC2Q13487 334 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 VGLL4Q14135 290 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PDIA5Q14554 519 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 SEPT2Q15019 361 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 NONOQ15233 471 aaKnown RBP eCLIP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 ZNF174Q15697 407 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 STX1AQ16623 288 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 LONRF3Q496Y0 759 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 HEATR3Q7Z4Q2 680 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 CKAP2LQ8IYA6 745 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 REXO1Q8N1G1 1221 aaKnown RBP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 GPKOWQ92917 476 aaPredicted RBP eCLIP6.14□□□□□ -1.43
COL17A1-206ENST00000483876 BADQ92934 168 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 AK8Q96MA6 479 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 CLIC6Q96NY7 704 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 PANK2Q9BZ23 570 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 UBA5Q9GZZ9 404 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 ARHGEF10LQ9HCE6 1279 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 VAT1LQ9HCJ6 419 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 CD320Q9NPF0 282 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 RIC8AQ9NPQ8 531 aa6.14□□□□□ -1.43
COL17A1-206ENST00000483876 EPG5Q9HCE0 2579 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 MYH6P13533 1939 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 ATRXP46100 2492 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PHF20L1A8MW92 1017 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PDHXO00330 501 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 SLC26A4O43511 780 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CTNND1O60716 968 aaKnown RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 FOSP01100 380 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 GH2P01242 217 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 HMGCRP04035 888 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 ASNSP08243 561 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 BMP3P12645 472 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CLK2P49760 499 aaKnown RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 ADCY7P51828 1080 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 NLRP12P59046 1061 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 RASA3Q14644 834 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 IQCB1Q15051 598 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 ZRSR1Q15695 479 aaKnown RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 ANO6Q4KMQ2 910 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PPP4R3AQ6IN85 833 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 MOXD1Q6UVY6 613 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 DTHD1Q6ZMT9 781 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 SH3RF1Q7Z6J0 888 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 NEK8Q86SG6 692 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CEP57L1Q8IYX8 460 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 LRRC47Q8N1G4 583 aaKnown RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 SAMD3Q8N6K7 520 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 IQUBQ8NA54 791 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 RNF214Q8ND24 703 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CNNM3Q8NE01 707 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PRSS33Q8NF86 280 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CUL5Q93034 780 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 TEPSINQ96N21 525 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 AMNQ9BXJ7 453 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CCSER1Q9C0I3 900 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CSRNP2Q9H175 543 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CUEDC2Q9H467 287 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PSTPIP2Q9H939 334 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CBX8Q9HC52 389 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 GOPCQ9HD26 462 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 GPCPD1Q9NPB8 672 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PRDM5Q9NQX1 630 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-206ENST00000483876 PNMA2Q9UL42 364 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms