RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PHF24Q9UPV7 400 aa30.44■■■□□ 2.46
GTF3C4-202ENST00000483873 SMCO2A6NFE2 343 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 RGS20O76081 388 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 TXNP10599 105 aaKnown RBP30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 CST5P28325 142 aaPredicted RBP30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 ADCY7P51828 1080 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 SSRP1Q08945 709 aaKnown RBP30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 KCNA10Q16322 511 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 NECAB1Q8N987 351 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 AP5M1Q9H0R1 490 aa30.43■■■□□ 2.46
GTF3C4-202ENST00000483873 ATN1P54259 1190 aaPredicted RBP30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 NKX3-2P78367 333 aa30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 MRPS9P82933 396 aaKnown RBP30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 TTLL4Q14679 1199 aa30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 LRRC26Q2I0M4 334 aa30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 CCDC62Q6P9F0 684 aa30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 DOCK5Q9H7D0 1870 aa30.42■■■□□ 2.46
GTF3C4-202ENST00000483873 ADAMTS3O15072 1205 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 GNASQ5JWF2 1037 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 CPLX2Q6PUV4 134 aaKnown RBP30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 TRIM22Q8IYM9 498 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 PGBD1Q96JS3 809 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 TSEN34Q9BSV6 310 aaKnown RBP30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 UPF2Q9HAU5 1272 aaKnown RBP30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 PCDHA6Q9UN73 950 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 Q9Y3F1 56 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 PCDHA8Q9Y5H6 950 aa30.41■■■□□ 2.46
GTF3C4-202ENST00000483873 A0A1W2PQ45 241 aaPredicted RBP30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 A0A1W2PQY0 241 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 ACLYP53396 1101 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 FSCN1Q16658 493 aaKnown RBP30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 LY6KQ17RY6 165 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 OR6J1Q8NGC5 347 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 TMEM260Q9NX78 707 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 VPS54Q9P1Q0 977 aa30.4■■■□□ 2.46
GTF3C4-202ENST00000483873 SPDYE3A6NKU9 549 aa30.39■■■□□ 2.46
GTF3C4-202ENST00000483873 CTDNEP1O95476 244 aa30.39■■■□□ 2.46
GTF3C4-202ENST00000483873 NKRFO15226 690 aaKnown RBP eCLIP30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 ASGR1P07306 291 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 GTF3C6Q969F1 213 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 AIFM3Q96NN9 605 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 ZMYND12Q9H0C1 365 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 RTEL1Q9NZ71 1219 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 MRVI1Q9Y6F6 885 aa30.39■■■□□ 2.45
GTF3C4-202ENST00000483873 ESYT2A0FGR8 921 aa30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 MOXD2PA6NHM9 499 aa30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 DEXIO95424 95 aa30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 CLK2P49760 499 aaKnown RBP30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 PCNX4Q63HM2 1172 aa30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 SLC39A5Q6ZMH5 540 aa30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 PCSK9Q8NBP7 692 aaKnown RBP30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 DDX41Q9UJV9 622 aaKnown RBP30.38■■■□□ 2.45
GTF3C4-202ENST00000483873 EVI5O60447 810 aa30.37■■■□□ 2.45
GTF3C4-202ENST00000483873 ST3GAL1Q11201 340 aa30.37■■■□□ 2.45
GTF3C4-202ENST00000483873 C7orf61Q8IZ16 206 aa30.37■■■□□ 2.45
GTF3C4-202ENST00000483873 CCDC12Q8WUD4 166 aaPredicted RBP30.37■■■□□ 2.45
GTF3C4-202ENST00000483873 TBC1D32Q96NH3 1257 aa30.37■■■□□ 2.45
GTF3C4-202ENST00000483873 INPP4AQ96PE3 977 aaPredicted RBP30.36■■■□□ 2.45
GTF3C4-202ENST00000483873 ANO3Q9BYT9 981 aa30.36■■■□□ 2.45
GTF3C4-202ENST00000483873 CDKL5O76039 1030 aa30.35■■■□□ 2.45
GTF3C4-202ENST00000483873 ARHGAP1Q07960 439 aa30.35■■■□□ 2.45
GTF3C4-202ENST00000483873 JAKMIP3Q5VZ66 844 aa30.35■■■□□ 2.45
GTF3C4-202ENST00000483873 GLT8D2Q9H1C3 349 aa30.35■■■□□ 2.45
GTF3C4-202ENST00000483873 C6orf50Q9HD87 102 aa30.35■■■□□ 2.45
GTF3C4-202ENST00000483873 STK36Q9NRP7 1315 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 RTP1P59025 263 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 SP2Q02086 613 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 SEMA3FQ13275 785 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 CXCL17Q6UXB2 119 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 TEX2Q8IWB9 1127 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 CCDC148Q8NFR7 591 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 STARD7Q9NQZ5 370 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 LIMCH1Q9UPQ0 1083 aa30.34■■■□□ 2.45
GTF3C4-202ENST00000483873 SORBS3O60504 671 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 STAM2O75886 525 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 GH1P01241 217 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 AP3B2Q13367 1082 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 SNX17Q15036 470 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 RABEP1Q15276 862 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 XRRA1Q6P2D8 792 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 RASGRP4Q8TDF6 673 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 SH3GLB2Q9NR46 395 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 CEP290O15078 2479 aa30.33■■■□□ 2.45
GTF3C4-202ENST00000483873 FOSP01100 380 aaPredicted RBP30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 UBA1P22314 1058 aaKnown RBP30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 CPT1AP50416 773 aa30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 GLT1D1Q96MS3 346 aa30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 EHMT1Q9H9B1 1298 aa30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 PCDH10Q9P2E7 1040 aa30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 ATP11BQ9Y2G3 1177 aa30.32■■■□□ 2.44
GTF3C4-202ENST00000483873 H0YGN5 161 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 GNA11P29992 359 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 GNPTABQ3T906 1256 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 TRIM60Q495X7 471 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 KCNV1Q6PIU1 500 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 REXO1Q8N1G1 1221 aaKnown RBP30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 NSUN7Q8NE18 718 aaKnown RBP30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 AFG1LQ8WV93 481 aa30.31■■■□□ 2.44
GTF3C4-202ENST00000483873 ZEB2O60315 1214 aa30.3■■■□□ 2.44
GTF3C4-202ENST00000483873 ICAM3P32942 547 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms