RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RANBP6O60518 1105 aaKnown RBP12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 ARHGAP1Q07960 439 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 PPP4R3BQ5MIZ7 849 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 CHST3Q7LGC8 479 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 CRBNQ96SW2 442 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 HDAC6Q9UBN7 1215 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
SMARCC1-205ENST00000483847 MS4A1P11836 297 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 ZP2Q05996 745 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 IKBKEQ14164 716 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 TRIM71Q2Q1W2 868 aaKnown RBP12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 ZNF618Q5T7W0 954 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 SNX27Q96L92 541 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
SMARCC1-205ENST00000483847 PARNO95453 639 aaKnown RBP12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 GH1P01241 217 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 HTRA4P83105 476 aaPredicted RBP12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 ZNF200P98182 395 aaPredicted RBP12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 HIC1Q14526 733 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 EPC2Q52LR7 807 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 ZMYM1Q5SVZ6 1142 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 HFE2Q6ZVN8 426 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 PHOX2BQ99453 314 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 INSL6Q9Y581 213 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 MICAL3Q7RTP6 2002 aa12.81□□□□□ -0.36
SMARCC1-205ENST00000483847 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 EFCAB14O75071 495 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 LGR5O75473 907 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 ZNF286BP0CG31 522 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 PSEN2P49810 448 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 COL19A1Q14993 1142 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 USH1GQ495M9 461 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 TCEAL5Q5H9L2 206 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 PABPC5Q96DU9 382 aaKnown RBP12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 COL20A1Q9P218 1284 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
SMARCC1-205ENST00000483847 USP34Q70CQ2 3546 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 ORC4O43929 436 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 PDHBP11177 359 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 IRS1P35568 1242 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 PTK7Q13308 1070 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 MFSD10Q14728 455 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 OTUD7AQ8TE49 926 aaPredicted RBP12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 TAAR1Q96RJ0 339 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 OSBPL7Q9BZF2 842 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 KCNH6Q9H252 994 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
SMARCC1-205ENST00000483847 MYO7AQ13402 2215 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 B4DLN1 442 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 H3BNC9 293 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 HAS3O00219 553 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 F2P00734 622 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 AMHP03971 560 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 FGRP09769 529 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 LTBRP36941 435 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 ZNF543Q08ER8 600 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 GPM6BQ13491 265 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 DGKDQ16760 1214 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 PTPROQ16827 1216 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 ADHFE1Q8IWW8 467 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 PI4K2BQ8TCG2 481 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 PRKAG3Q9UGI9 489 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
SMARCC1-205ENST00000483847 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 CLUL1Q15846 466 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 TMEM192Q8IY95 271 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms