RNA–Protein interactions for RNA: ENST00000483827.1

ZC3HC1-210, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5

Gene ZC3HC1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-210ENST00000483827 PGM5Q15124 567 aa17.1■□□□□ 0.33
ZC3HC1-210ENST00000483827 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
ZC3HC1-210ENST00000483827 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
ZC3HC1-210ENST00000483827 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
ZC3HC1-210ENST00000483827 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
ZC3HC1-210ENST00000483827 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 RGS20O76081 388 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 REC8O95072 547 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 RAG1P15918 1043 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 PURAQ00577 322 aaKnown RBP17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 PPP1R13LQ8WUF5 828 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 TBX21Q9UL17 535 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 SCN10AQ9Y5Y9 1956 aa17.09■□□□□ 0.33
ZC3HC1-210ENST00000483827 A6NJR5 290 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 ZBTB43O43298 467 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 CD4P01730 458 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 EPHB4P54760 987 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 ARHGAP1Q07960 439 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 RTN1Q16799 776 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 C9orf50Q5SZB4 431 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 Q6ZUG5 572 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
ZC3HC1-210ENST00000483827 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 GOLGA8AA7E2F4 631 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 MEIS2O14770 477 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 SORBS3O60504 671 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 GH1P01241 217 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 CCND2P30279 289 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 FGD1P98174 961 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 SHHQ15465 462 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 LRIT3Q3SXY7 679 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 BRDTQ58F21 947 aaPredicted RBP17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
ZC3HC1-210ENST00000483827 TLR3O15455 904 aaKnown RBP17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 B4GALT4O60513 344 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 TIMP1P01033 207 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 MMP3P08254 477 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 CDC27P30260 824 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 FUT2Q10981 343 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 HEATR3Q7Z4Q2 680 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 SMARCC2Q8TAQ2 1214 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 BRF1Q92994 677 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 PPP1R12CQ9BZL4 782 aa17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 RBM28Q9NW13 759 aaKnown RBP17.06■□□□□ 0.32
ZC3HC1-210ENST00000483827 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 FRMPD4Q14CM0 1322 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 SP2Q02086 613 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 UBE2SQ16763 222 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 NBPF20Q3BBV1 942 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 CUL5Q93034 780 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 ALDH8A1Q9H2A2 487 aaPredicted RBP17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 TRMT13Q9NUP7 481 aaKnown RBP17.05■□□□□ 0.32
ZC3HC1-210ENST00000483827 UMODL1Q5DID0 1318 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 CYP2C18P33260 490 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 FPGSQ05932 587 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 RTEL1Q9NZ71 1219 aa17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 V9GY48 417 aaPredicted RBP17.04■□□□□ 0.32
ZC3HC1-210ENST00000483827 COL6A3P12111 3177 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 KPNA6O60684 536 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 GGPS1O95749 300 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 MFSD5Q6N075 450 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 KAT2BQ92831 832 aa17.03■□□□□ 0.32
ZC3HC1-210ENST00000483827 CYP2C9P11712 490 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 CSF2RAP15509 400 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 PSMA5P28066 241 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 RCAN1P53805 252 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 SEMA3FQ13275 785 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 LAMC2Q13753 1193 aa17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 CELF3Q5SZQ8 465 aaKnown RBP17.02■□□□□ 0.32
ZC3HC1-210ENST00000483827 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms