RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 BEX3Q00994 111 aa20.7■□□□□ 0.9
HDAC6-225ENST00000483506 PKN1Q16512 942 aa20.7■□□□□ 0.9
HDAC6-225ENST00000483506 XRRA1Q6P2D8 792 aa20.7■□□□□ 0.9
HDAC6-225ENST00000483506 SEPT14Q6ZU15 432 aa20.7■□□□□ 0.9
HDAC6-225ENST00000483506 NCOA5Q9HCD5 579 aaKnown RBP20.7■□□□□ 0.9
HDAC6-225ENST00000483506 RIC8AQ9NPQ8 531 aa20.7■□□□□ 0.9
HDAC6-225ENST00000483506 ZEB2O60315 1214 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 CABYRO75952 493 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 CPT1AP50416 773 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 NAPAP54920 295 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
HDAC6-225ENST00000483506 ANKRD1Q15327 319 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 KCNV1Q6PIU1 500 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 OR6J1Q8NGC5 347 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 EMID1Q96A84 441 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-225ENST00000483506 GLT1D1Q96MS3 346 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 GLT8D2Q9H1C3 349 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 STARD7Q9NQZ5 370 aa20.69■□□□□ 0.9
HDAC6-225ENST00000483506 DDX41Q9UJV9 622 aaKnown RBP20.69■□□□□ 0.9
HDAC6-225ENST00000483506 ESYT2A0FGR8 921 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 A6NJR5 290 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 TGFB3P10600 412 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 MYCLP12524 364 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-225ENST00000483506 MRPS9P82933 396 aaKnown RBP20.68■□□□□ 0.9
HDAC6-225ENST00000483506 PCNX4Q63HM2 1172 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 COPS5Q92905 334 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 PHKBQ93100 1093 aa20.68■□□□□ 0.9
HDAC6-225ENST00000483506 INPP4AQ96PE3 977 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-225ENST00000483506 ICAM3P32942 547 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 ADCY7P51828 1080 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 AK2P54819 239 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 ARHGAP1Q07960 439 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 UBE2SQ16763 222 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 TRIM60Q495X7 471 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 ANKRD33Q7Z3H0 272 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 LARP6Q9BRS8 491 aaKnown RBP20.67■□□□□ 0.9
HDAC6-225ENST00000483506 ZMYND12Q9H0C1 365 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 TPCN1Q9ULQ1 816 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
HDAC6-225ENST00000483506 SCN10AQ9Y5Y9 1956 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 RANBP2P49792 3224 aaKnown RBP20.66■□□□□ 0.9
HDAC6-225ENST00000483506 A0A0U1RQG5 324 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-225ENST00000483506 SMCO2A6NFE2 343 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 SPDYE3A6NKU9 549 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 PFKFB2O60825 505 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 GH1P01241 217 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 CLK2P49760 499 aaKnown RBP20.66■□□□□ 0.9
HDAC6-225ENST00000483506 CDK7P50613 346 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 LY6KQ17RY6 165 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 CXCL17Q6UXB2 119 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 SLC43A3Q8NBI5 491 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-225ENST00000483506 TOX2Q96NM4 488 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 SEZ6LQ9BYH1 1024 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 POLR3EQ9NVU0 708 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 ATP11BQ9Y2G3 1177 aa20.66■□□□□ 0.9
HDAC6-225ENST00000483506 FOSP01100 380 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-225ENST00000483506 PURAQ00577 322 aaKnown RBP20.65■□□□□ 0.9
HDAC6-225ENST00000483506 AKAP17AQ02040 695 aaKnown RBP20.65■□□□□ 0.9
HDAC6-225ENST00000483506 AP3B2Q13367 1082 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 GNPTABQ3T906 1256 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 BRDTQ58F21 947 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-225ENST00000483506 SLC26A6Q9BXS9 759 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 PRO3102Q9H379 93 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 PCDHA6Q9UN73 950 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 PCDHA8Q9Y5H6 950 aa20.65■□□□□ 0.9
HDAC6-225ENST00000483506 LTBP2Q14767 1821 aa20.64■□□□□ 0.9
HDAC6-225ENST00000483506 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 ARVCFO00192 962 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 CPLX1O14810 134 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 KPNA6O60684 536 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
HDAC6-225ENST00000483506 TLE2Q04725 743 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 SCRN1Q12765 414 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 CPLX2Q6PUV4 134 aaKnown RBP20.64■□□□□ 0.89
HDAC6-225ENST00000483506 TRIM22Q8IYM9 498 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 FAM177A1Q8N128 213 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-225ENST00000483506 KIF2CQ99661 725 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 EHMT1Q9H9B1 1298 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 SH3GLB2Q9NR46 395 aa20.64■□□□□ 0.89
HDAC6-225ENST00000483506 ZMYND8Q9ULU4 1186 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-225ENST00000483506 GRIN2DO15399 1336 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 SPATA31C2B4DYI2 1134 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 MMP3P08254 477 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 HOXD8P13378 290 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-225ENST00000483506 UBA1P22314 1058 aaKnown RBP20.63■□□□□ 0.89
HDAC6-225ENST00000483506 NEK4P51957 841 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 SP2Q02086 613 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 SSRP1Q08945 709 aaKnown RBP20.63■□□□□ 0.89
HDAC6-225ENST00000483506 STK3Q13188 491 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 SEMA3FQ13275 785 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 LAMC2Q13753 1193 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 CELF3Q5SZQ8 465 aaKnown RBP20.63■□□□□ 0.89
HDAC6-225ENST00000483506 CCDC148Q8NFR7 591 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 PPTC7Q8NI37 304 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 SLKQ9H2G2 1235 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-225ENST00000483506 PDLIM7Q9NR12 457 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 MYH7BA7E2Y1 1941 aa20.63■□□□□ 0.89
HDAC6-225ENST00000483506 STK36Q9NRP7 1315 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 FIBPO43427 364 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms