RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
SSR1-208ENST00000483409 FSCN1Q16658 493 aaKnown RBP15.39■□□□□ 0.05
SSR1-208ENST00000483409 CCSAPQ6IQ19 270 aaPredicted RBP15.39■□□□□ 0.05
SSR1-208ENST00000483409 C7orf61Q8IZ16 206 aa15.39■□□□□ 0.05
SSR1-208ENST00000483409 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
SSR1-208ENST00000483409 RNF26Q9BY78 433 aaPredicted RBP15.39■□□□□ 0.05
SSR1-208ENST00000483409 SLKQ9H2G2 1235 aaPredicted RBP15.39■□□□□ 0.05
SSR1-208ENST00000483409 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
SSR1-208ENST00000483409 CEP290O15078 2479 aa15.39■□□□□ 0.05
SSR1-208ENST00000483409 SMCO2A6NFE2 343 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 SPDYE3A6NKU9 549 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 SSRP1Q08945 709 aaKnown RBP15.38■□□□□ 0.05
SSR1-208ENST00000483409 LY6KQ17RY6 165 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
SSR1-208ENST00000483409 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 PCSK9Q8NBP7 692 aaKnown RBP15.38■□□□□ 0.05
SSR1-208ENST00000483409 TSEN34Q9BSV6 310 aaKnown RBP15.38■□□□□ 0.05
SSR1-208ENST00000483409 RIC8AQ9NPQ8 531 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 Q9Y3F1 56 aa15.38■□□□□ 0.05
SSR1-208ENST00000483409 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 NKRFO15226 690 aaKnown RBP eCLIP15.37■□□□□ 0.05
SSR1-208ENST00000483409 PFKFB2O60825 505 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 DTNBO60941 627 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 RGS20O76081 388 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 LARGE1O95461 756 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 ASGR1P07306 291 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 RTP1P59025 263 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 NKX3-2P78367 333 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 MRPS9P82933 396 aaKnown RBP15.37■□□□□ 0.05
SSR1-208ENST00000483409 CCDC62Q6P9F0 684 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 SLC39A5Q6ZMH5 540 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 NECAB1Q8N987 351 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 PGBD1Q96JS3 809 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 KIF2CQ99661 725 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
SSR1-208ENST00000483409 H0YGN5 161 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
SSR1-208ENST00000483409 ME3Q16798 604 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 PRPF38BQ5VTL8 546 aaKnown RBP15.36■□□□□ 0.05
SSR1-208ENST00000483409 PCNX4Q63HM2 1172 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 CCDC12Q8WUD4 166 aaPredicted RBP15.36■□□□□ 0.05
SSR1-208ENST00000483409 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
SSR1-208ENST00000483409 STARD7Q9NQZ5 370 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 TMEM260Q9NX78 707 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 VPS54Q9P1Q0 977 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 DDX41Q9UJV9 622 aaKnown RBP15.36■□□□□ 0.05
SSR1-208ENST00000483409 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
SSR1-208ENST00000483409 ADAMTS3O15072 1205 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 ZEB2O60315 1214 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 SORBS3O60504 671 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 CDKL5O76039 1030 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 GH1P01241 217 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 CPT1AP50416 773 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 TRIM60Q495X7 471 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 GLT1D1Q96MS3 346 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 ANO3Q9BYT9 981 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 EHMT1Q9H9B1 1298 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
SSR1-208ENST00000483409 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
SSR1-208ENST00000483409 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 STAM2O75886 525 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 DEXIO95424 95 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 MYL3P08590 195 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 UBA1P22314 1058 aaKnown RBP15.34■□□□□ 0.05
SSR1-208ENST00000483409 CLK2P49760 499 aaKnown RBP15.34■□□□□ 0.05
SSR1-208ENST00000483409 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 SNX17Q15036 470 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 GNPTABQ3T906 1256 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 INPP4AQ96PE3 977 aaPredicted RBP15.34■□□□□ 0.05
SSR1-208ENST00000483409 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
SSR1-208ENST00000483409 PQBP1O60828 265 aaKnown RBP15.33■□□□□ 0.04
SSR1-208ENST00000483409 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 SYN1P17600 705 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 GNA11P29992 359 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 SP2Q02086 613 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 SEMA3FQ13275 785 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 BRDTQ58F21 947 aaPredicted RBP15.33■□□□□ 0.04
SSR1-208ENST00000483409 XRRA1Q6P2D8 792 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 KCNV1Q6PIU1 500 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
SSR1-208ENST00000483409 RASGRP4Q8TDF6 673 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 LTBP2Q14767 1821 aa15.33■□□□□ 0.04
SSR1-208ENST00000483409 A0A0U1RQG5 324 aaPredicted RBP15.32■□□□□ 0.04
SSR1-208ENST00000483409 A6NJR5 290 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms