RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
COL16A1-213ENST00000482910 WWC2Q6AWC2 1192 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
COL16A1-213ENST00000482910 GLT8D2Q9H1C3 349 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-213ENST00000482910 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
COL16A1-213ENST00000482910 ZMYND8Q9ULU4 1186 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-213ENST00000482910 KPNA6O60684 536 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 GH1P01241 217 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 CDK7P50613 346 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 TLE2Q04725 743 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 NTRK3Q16288 839 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 PFKFB3Q16875 520 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-213ENST00000482910 SLC43A3Q8NBI5 491 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 IL31RAQ8NI17 732 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
COL16A1-213ENST00000482910 EMID1Q96A84 441 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-213ENST00000482910 GDF15Q99988 308 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
COL16A1-213ENST00000482910 DDX41Q9UJV9 622 aaKnown RBP17.38■□□□□ 0.37
COL16A1-213ENST00000482910 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 A0A1W2PPC1 479 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 STXBP3O00186 592 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 ARVCFO00192 962 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 PRPF3O43395 683 aaKnown RBP17.37■□□□□ 0.37
COL16A1-213ENST00000482910 RGS20O76081 388 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 MYCLP12524 364 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-213ENST00000482910 IFNAR1P17181 557 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 PTGS1P23219 599 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 BMP8BP34820 402 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 NAPAP54920 295 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 INPP4AQ96PE3 977 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-213ENST00000482910 RNF26Q9BY78 433 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-213ENST00000482910 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 PRKAG2Q9UGJ0 569 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-213ENST00000482910 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
COL16A1-213ENST00000482910 ESYT2A0FGR8 921 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 SCG2P13521 617 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 SYN1P17600 705 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 ICAM3P32942 547 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
COL16A1-213ENST00000482910 PURAQ00577 322 aaKnown RBP17.36■□□□□ 0.37
COL16A1-213ENST00000482910 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 LY6KQ17RY6 165 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 GNPTABQ3T906 1256 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 TYW1BQ6NUM6 668 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 COPS5Q92905 334 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 VTI1AQ96AJ9 217 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 PDLIM7Q9NR12 457 aa17.36■□□□□ 0.37
COL16A1-213ENST00000482910 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 SPDYE3A6NKU9 549 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 DCDC2CA8MYV0 355 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-213ENST00000482910 CLTBP09497 229 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 LAMC2Q13753 1193 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-213ENST00000482910 MTG1Q9BT17 334 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-213ENST00000482910 EHMT1Q9H9B1 1298 aa17.35■□□□□ 0.37
COL16A1-213ENST00000482910 KIAA0355O15063 1070 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 PQBP1O60828 265 aaKnown RBP17.34■□□□□ 0.37
COL16A1-213ENST00000482910 SEC24BO95487 1268 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 MAGEA10P43363 369 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-213ENST00000482910 ADCY7P51828 1080 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
COL16A1-213ENST00000482910 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
COL16A1-213ENST00000482910 ITGA7Q13683 1181 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 PKN1Q16512 942 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
COL16A1-213ENST00000482910 FAM126BQ8IXS8 530 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 TRIOBPQ9H2D6 2365 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 PCDHA6Q9UN73 950 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 PCDHA8Q9Y5H6 950 aa17.34■□□□□ 0.37
COL16A1-213ENST00000482910 GRIN2DO15399 1336 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 SMCO2A6NFE2 343 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 TLR3O15455 904 aaKnown RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 FIBPO43427 364 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 MMP3P08254 477 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 HOXD8P13378 290 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 FAAP100Q0VG06 881 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 AP3B2Q13367 1082 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 UBE2SQ16763 222 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 CELF3Q5SZQ8 465 aaKnown RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 MCTP2Q6DN12 878 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 DHX37Q8IY37 1157 aaKnown RBP17.33■□□□□ 0.36
COL16A1-213ENST00000482910 PPTC7Q8NI37 304 aa17.33■□□□□ 0.36
COL16A1-213ENST00000482910 AFG1LQ8WV93 481 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms