RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 HCN4Q9Y3Q4 1203 aa15.03■□□□□ -0
TMEM54-206ENST00000482771 ARIH1Q9Y4X5 557 aaPredicted RBP15.03■□□□□ -0
TMEM54-206ENST00000482771 PIEZO1Q92508 2521 aa15.03■□□□□ -0
TMEM54-206ENST00000482771 ABHD14A-ACY1A0A1B0GW23 586 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 GPR37L1O60883 481 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 PARNO95453 639 aaKnown RBP15.02■□□□□ -0
TMEM54-206ENST00000482771 CXCL10P02778 98 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 HSPD1P10809 573 aaKnown RBP15.02■□□□□ -0
TMEM54-206ENST00000482771 CKBP12277 381 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 STXBP2Q15833 593 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 TCTN1Q2MV58 587 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 FAM117BQ6P1L5 589 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 CNKSR3Q6P9H4 555 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 C7orf31Q8N865 590 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 TGS1Q96RS0 853 aaKnown RBP15.02■□□□□ -0
TMEM54-206ENST00000482771 ZKSCAN3Q9BRR0 538 aa15.02■□□□□ -0
TMEM54-206ENST00000482771 MUC6Q6W4X9 2439 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 A0A0D9SFI3 127 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 FAM86C2PA6NEL3 165 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 GJB5O95377 273 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 PSEN2P49810 448 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 ERVK-21P61565 698 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 IKBKEQ14164 716 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 DGKDQ16760 1214 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 GPATCH4Q5T3I0 446 aaKnown RBP15.01□□□□□ -0.01
TMEM54-206ENST00000482771 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 RMDN3Q96TC7 470 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 COL20A1Q9P218 1284 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 GTF2IRD1Q9UHL9 959 aa15.01□□□□□ -0.01
TMEM54-206ENST00000482771 DDX41Q9UJV9 622 aaKnown RBP15.01□□□□□ -0.01
TMEM54-206ENST00000482771 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15□□□□□ -0.01
TMEM54-206ENST00000482771 LINC01553A4QN01 128 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 PI4K2BG5E9Z4 385 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 ZNF200P98182 395 aaPredicted RBP15□□□□□ -0.01
TMEM54-206ENST00000482771 CDC37Q16543 378 aaPredicted RBP15□□□□□ -0.01
TMEM54-206ENST00000482771 ZNF618Q5T7W0 954 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 ARHGEF16Q5VV41 709 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 ZNF589Q86UQ0 364 aaPredicted RBP15□□□□□ -0.01
TMEM54-206ENST00000482771 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 VAT1LQ9HCJ6 419 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 C11orf16Q9NQ32 467 aa15□□□□□ -0.01
TMEM54-206ENST00000482771 ABCB11O95342 1321 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 EIF3JO75822 258 aaKnown RBP14.99□□□□□ -0.01
TMEM54-206ENST00000482771 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
TMEM54-206ENST00000482771 PDE1AP54750 535 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 RBL2Q08999 1139 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
TMEM54-206ENST00000482771 PTK7Q13308 1070 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 LAMC2Q13753 1193 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 MFSD10Q14728 455 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 KIAA0753Q2KHM9 967 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 ESR2Q92731 530 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 MAF1Q9H063 256 aa14.99□□□□□ -0.01
TMEM54-206ENST00000482771 RNF41Q9H4P4 317 aaPredicted RBP14.99□□□□□ -0.01
TMEM54-206ENST00000482771 UBE2ZQ9H832 354 aaPredicted RBP14.99□□□□□ -0.01
TMEM54-206ENST00000482771 EFCAB14O75071 495 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 NR3C2P08235 984 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 EIF2AK2P19525 551 aaKnown RBP14.98□□□□□ -0.01
TMEM54-206ENST00000482771 KCNA5P22460 613 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 MBTPS1Q14703 1052 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 TRIM71Q2Q1W2 868 aaKnown RBP14.98□□□□□ -0.01
TMEM54-206ENST00000482771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
TMEM54-206ENST00000482771 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
TMEM54-206ENST00000482771 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 WNT8BQ93098 351 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 MRPL11Q9Y3B7 192 aaKnown RBP14.98□□□□□ -0.01
TMEM54-206ENST00000482771 MRVI1Q9Y6F6 885 aa14.98□□□□□ -0.01
TMEM54-206ENST00000482771 HAS3O00219 553 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 DHX16O60231 1041 aaKnown RBP14.97□□□□□ -0.01
TMEM54-206ENST00000482771 PPFIA4O75335 1185 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 ZNF286BP0CG31 522 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 QRICH1Q2TAL8 776 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 LEXMQ3ZCV2 418 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 TRAF7Q6Q0C0 670 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 FBXO11Q86XK2 927 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 FAM178BQ8IXR5 827 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 GJD3Q8N144 294 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
TMEM54-206ENST00000482771 EMID1Q96A84 441 aaPredicted RBP14.97□□□□□ -0.01
TMEM54-206ENST00000482771 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 KAT14Q9H8E8 782 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 INSL6Q9Y581 213 aa14.97□□□□□ -0.01
TMEM54-206ENST00000482771 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 ZNF213O14771 459 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 SORBS3O60504 671 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 KDM4AO75164 1064 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 LGR5O75473 907 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 CFBP00751 764 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
TMEM54-206ENST00000482771 HIC1Q14526 733 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 CCDC178Q5BJE1 867 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 TICAM2Q86XR7 235 aa14.96□□□□□ -0.01
TMEM54-206ENST00000482771 FBXO22Q8NEZ5 403 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms