RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 SCN10AQ9Y5Y9 1956 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 B4GALT4O60513 344 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 SUPT20HL2P0C7V6 817 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 EPHB4P54760 987 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 AFG1LQ8WV93 481 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 CUL5Q93034 780 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 LAMA3Q16787 3333 aa17.72■□□□□ 0.43
EXOSC3-205ENST00000482614 MYH7BA7E2Y1 1941 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 MMP3P08254 477 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 PTPN11Q06124 597 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 LAMC2Q13753 1193 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 NBPF20Q3BBV1 942 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 DEFB123Q8N688 67 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 EMID1Q96A84 441 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 RBM28Q9NW13 759 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-205ENST00000482614 STAM2O75886 525 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 TGFB3P10600 412 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 CYP2C18P33260 490 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 FAM47CQ5HY64 1035 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 KCNB2Q92953 911 aa17.7■□□□□ 0.42
EXOSC3-205ENST00000482614 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 ZBTB43O43298 467 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 RGS20O76081 388 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 REC8O95072 547 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 CSF2RAP15509 400 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 DGKDQ16760 1214 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 FRMPD4Q14CM0 1322 aa17.69■□□□□ 0.42
EXOSC3-205ENST00000482614 HSPA4P34932 840 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 GNPTABQ3T906 1256 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 MYSM1Q5VVJ2 828 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 PSRC1Q6PGN9 363 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 Q7L0L9 218 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 PPTC7Q8NI37 304 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
EXOSC3-205ENST00000482614 MEIS2O14770 477 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 RCAN1P53805 252 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 FGD1P98174 961 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 RTN1Q16799 776 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 CELF3Q5SZQ8 465 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 ERICH6BQ5W0A0 696 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 XRRA1Q6P2D8 792 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 C16orf59Q7L2K0 433 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 KATNAL1Q9BW62 490 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 PSTPIP2Q9H939 334 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 MTMR10Q9NXD2 777 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 SNX14Q9Y5W7 946 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 UMODL1Q5DID0 1318 aa17.67■□□□□ 0.42
EXOSC3-205ENST00000482614 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 PPFIA4O75335 1185 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 GGPS1O95749 300 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 ACRP10323 421 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 CYP2C9P11712 490 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 ICAM3P32942 547 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 CCL23P55773 120 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 CHMP4BP1P59074 171 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 MRPS9P82933 396 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 ZNF697Q5TEC3 545 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 ZNF365Q70YC5 407 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 SESTD1Q86VW0 696 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 RPUSD2Q8IZ73 545 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 KAT2BQ92831 832 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 JAKMIP1Q96N16 626 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
EXOSC3-205ENST00000482614 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
EXOSC3-205ENST00000482614 GOLGA8BA8MQT2 603 aa17.65■□□□□ 0.42
EXOSC3-205ENST00000482614 FGBP02675 491 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms