RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SMPD1P17405 629 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 SPINK2P20155 84 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 CAMK1Q14012 370 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 LRRC24Q50LG9 513 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 C19orf48Q6RUI8 117 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 PDZD3Q86UT5 571 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 EFHBQ8N7U6 833 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 KRI1Q8N9T8 703 aaKnown RBP8.09□□□□□ -1.11
CHD6-209ENST00000482596 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 SEZ6LQ9BYH1 1024 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 ERVK-5Q9HDB9 667 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 CDH22Q9UJ99 828 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 ABHD14A-ACY1A0A1B0GW23 586 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 C2CD4DB7Z1M9 353 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 GDF9O60383 454 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 NBNO60934 754 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 LGR5O75473 907 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 PRB1P04280 392 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 CTNNB1P35222 781 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 TMEM63BQ5T3F8 832 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 MAMDC4Q6UXC1 1216 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
CHD6-209ENST00000482596 TLK2Q86UE8 772 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 MYOCDQ8IZQ8 938 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 ZCCHC14Q8WYQ9 949 aaKnown RBP8.08□□□□□ -1.12
CHD6-209ENST00000482596 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 KIAA1683Q9H0B3 1180 aa8.08□□□□□ -1.12
CHD6-209ENST00000482596 MROH7-TTC4A0A0A0MT08 1334 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 ZMYND10O75800 440 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 PDE8BO95263 885 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 NRIP1P48552 1158 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 USP14P54578 494 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 SPEM2Q0P670 501 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 FAM47CQ5HY64 1035 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 METTL24Q5JXM2 366 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 KIAA1755Q5JYT7 1200 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 SPECC1Q5M775 1068 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 MAML2Q8IZL2 1156 aaPredicted RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 MSL3Q8N5Y2 521 aaKnown RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 VN1R2Q8NFZ6 395 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 ZNF384Q8TF68 577 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 APOL5Q9BWW9 433 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 LMAN2LQ9H0V9 348 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 ABHD16BQ9H3Z7 469 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 HOXC10Q9NYD6 342 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 PI4KBQ9UBF8 816 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
CHD6-209ENST00000482596 SMG5Q9UPR3 1016 aaKnown RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
CHD6-209ENST00000482596 SCN10AQ9Y5Y9 1956 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 GPR75-ASB3A0A0A6YYF3 556 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 TMEM8BA6NDV4 472 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 EIF4E1BA6NMX2 242 aaKnown RBP8.06□□□□□ -1.12
CHD6-209ENST00000482596 E9PSI1 815 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 DYNC1LI2O43237 492 aaPredicted RBP8.06□□□□□ -1.12
CHD6-209ENST00000482596 CXCL10P02778 98 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 HOXD8P13378 290 aaPredicted RBP8.06□□□□□ -1.12
CHD6-209ENST00000482596 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 FGFR2P21802 821 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 DNAJB1P25685 340 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 PPP2R1AP30153 589 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 TNFAIP2Q03169 654 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 BFSP2Q13515 415 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 G2E3Q7L622 706 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 SIX5Q8N196 739 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 MB21D1Q8N884 522 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 GATA6Q92908 595 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 FGD4Q96M96 766 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 YME1L1Q96TA2 773 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 GINM1Q9NU53 330 aa8.06□□□□□ -1.12
CHD6-209ENST00000482596 RALGAPA1Q6GYQ0 2036 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 C5orf67F2Z3F1 127 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 NR1I2O75469 434 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 UPP2O95045 317 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 SLC25A27O95847 323 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 TOP3BO95985 862 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 MMP1P03956 469 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 DCNP07585 359 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 GCGRP47871 477 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 IKBKEQ14164 716 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 RAB3GAP1Q15042 981 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 METTL16Q86W50 562 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 C1orf210Q8IVY1 113 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 SECISBP2LQ93073 1101 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 S1PR5Q9H228 398 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.05□□□□□ -1.12
CHD6-209ENST00000482596 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
CHD6-209ENST00000482596 ITPR3Q14573 2671 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms