RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 MRVI1Q9Y6F6 885 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 A0A1W2PPC1 479 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 RAG1P15918 1043 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 RPS6KB1P23443 525 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 CCND2P30279 289 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 CDK7P50613 346 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 CHMP4BP1P59074 171 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 ITGA7Q13683 1181 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.65
VAMP4-204ENST00000482519 USP26Q9BXU7 913 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 PSTPIP2Q9H939 334 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 POLR3EQ9NVU0 708 aa19.09■□□□□ 0.65
VAMP4-204ENST00000482519 TLR3O15455 904 aaKnown RBP19.08■□□□□ 0.64
VAMP4-204ENST00000482519 SORBS3O60504 671 aa19.08■□□□□ 0.64
VAMP4-204ENST00000482519 GH1P01241 217 aa19.08■□□□□ 0.64
VAMP4-204ENST00000482519 METAP2P50579 478 aaKnown RBP eCLIP19.08■□□□□ 0.64
VAMP4-204ENST00000482519 CCDC62Q6P9F0 684 aa19.08■□□□□ 0.64
VAMP4-204ENST00000482519 VSIG10LQ86VR7 867 aa19.08■□□□□ 0.64
VAMP4-204ENST00000482519 TDHQ8IZJ6 230 aa19.08■□□□□ 0.64
VAMP4-204ENST00000482519 DDX41Q9UJV9 622 aaKnown RBP19.08■□□□□ 0.64
VAMP4-204ENST00000482519 V9GY48 417 aaPredicted RBP19.08■□□□□ 0.64
VAMP4-204ENST00000482519 LTBP2Q14767 1821 aa19.07■□□□□ 0.64
VAMP4-204ENST00000482519 KIAA0355O15063 1070 aa19.07■□□□□ 0.64
VAMP4-204ENST00000482519 ITGB8P26012 769 aa19.07■□□□□ 0.64
VAMP4-204ENST00000482519 PURAQ00577 322 aaKnown RBP19.07■□□□□ 0.64
VAMP4-204ENST00000482519 AFG1LQ8WV93 481 aa19.07■□□□□ 0.64
VAMP4-204ENST00000482519 MTG1Q9BT17 334 aaPredicted RBP19.07■□□□□ 0.64
VAMP4-204ENST00000482519 GRIN2DO15399 1336 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 A6NJR5 290 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 CDC27P30260 824 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 ARHGAP1Q07960 439 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 FAM126BQ8IXS8 530 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 DHX37Q8IY37 1157 aaKnown RBP19.06■□□□□ 0.64
VAMP4-204ENST00000482519 PPP1R13LQ8WUF5 828 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 RTEL1Q9NZ71 1219 aa19.06■□□□□ 0.64
VAMP4-204ENST00000482519 PIK3CDO00329 1044 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 MEIS2O14770 477 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 EPB41L2O43491 1005 aaKnown RBP19.05■□□□□ 0.64
VAMP4-204ENST00000482519 KPNA6O60684 536 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 RGS20O76081 388 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 ADD1P35611 737 aaKnown RBP19.05■□□□□ 0.64
VAMP4-204ENST00000482519 UBE2SQ16763 222 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 FAM47CQ5HY64 1035 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 WWC2Q6AWC2 1192 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 RUFY3Q7L099 469 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 SLC43A3Q8NBI5 491 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 TRPV6Q9H1D0 765 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 FAM217BQ9NTX9 383 aaPredicted RBP19.05■□□□□ 0.64
VAMP4-204ENST00000482519 CYP46A1Q9Y6A2 500 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 MYH7BA7E2Y1 1941 aa19.05■□□□□ 0.64
VAMP4-204ENST00000482519 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 SOX1O00570 391 aaPredicted RBP19.04■□□□□ 0.64
VAMP4-204ENST00000482519 MMP3P08254 477 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 RCAN1P53805 252 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 NAPAP54920 295 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 FUT2Q10981 343 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 KCNV1Q6PIU1 500 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 UPF3BQ9BZI7 483 aaKnown RBP19.04■□□□□ 0.64
VAMP4-204ENST00000482519 PPP1R12CQ9BZL4 782 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
VAMP4-204ENST00000482519 TIMP1P01033 207 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 MRPS9P82933 396 aaKnown RBP19.03■□□□□ 0.64
VAMP4-204ENST00000482519 FPGSQ05932 587 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 LAMC2Q13753 1193 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 NBPF20Q3BBV1 942 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 GNPTABQ3T906 1256 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 LRCH3Q96II8 777 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 ALDH8A1Q9H2A2 487 aaPredicted RBP19.03■□□□□ 0.64
VAMP4-204ENST00000482519 ZSWIM6Q9HCJ5 1215 aa19.03■□□□□ 0.64
VAMP4-204ENST00000482519 SPDYE3A6NKU9 549 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 B4GALT4O60513 344 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 PPFIA3O75145 1194 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 GGPS1O95749 300 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 CD4P01730 458 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 CCT2P78371 535 aaKnown RBP19.02■□□□□ 0.64
VAMP4-204ENST00000482519 SP2Q02086 613 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 DGKDQ16760 1214 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 SPATA33Q96N06 139 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 LARP6Q9BRS8 491 aaKnown RBP19.02■□□□□ 0.64
VAMP4-204ENST00000482519 MLXIPQ9HAP2 919 aa19.02■□□□□ 0.64
VAMP4-204ENST00000482519 TRMT13Q9NUP7 481 aaKnown RBP19.02■□□□□ 0.64
VAMP4-204ENST00000482519 FRMPD4Q14CM0 1322 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 STAM2O75886 525 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 UBA1P22314 1058 aaKnown RBP19.01■□□□□ 0.63
VAMP4-204ENST00000482519 CYP2C18P33260 490 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 SHHQ15465 462 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 C9orf50Q5SZB4 431 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 CELF3Q5SZQ8 465 aaKnown RBP19.01■□□□□ 0.63
VAMP4-204ENST00000482519 MYSM1Q5VVJ2 828 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 PCNX4Q63HM2 1172 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 TYW1BQ6NUM6 668 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 FBXL16Q8N461 479 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 PPTC7Q8NI37 304 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 EMID1Q96A84 441 aaPredicted RBP19.01■□□□□ 0.63
VAMP4-204ENST00000482519 HIPK3Q9H422 1215 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 PCDHA6Q9UN73 950 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 PCDHA8Q9Y5H6 950 aa19.01■□□□□ 0.63
VAMP4-204ENST00000482519 SMCO2A6NFE2 343 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms