RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CDC45O75419 566 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 ZNF286BP0CG31 522 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 KIF5BP33176 963 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 PGM5Q15124 567 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 C16orf59Q7L2K0 433 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
CPSF4-212ENST00000482251 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
CPSF4-212ENST00000482251 RRP36Q96EU6 259 aaKnown RBP12.12□□□□□ -0.47
CPSF4-212ENST00000482251 TANC1Q9C0D5 1861 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 EIF3JO75822 258 aaKnown RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 RGS20O76081 388 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 GHRHRQ02643 423 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 MAF1Q9H063 256 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 TTYH1Q9H313 450 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
CPSF4-212ENST00000482251 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 SCN5AQ14524 2016 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 EYSQ5T1H1 3165 aa12.11□□□□□ -0.47
CPSF4-212ENST00000482251 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
CPSF4-212ENST00000482251 DNAJB2P25686 324 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 CCND2P30279 289 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 SRBD1Q8N5C6 995 aaKnown RBP12.1□□□□□ -0.47
CPSF4-212ENST00000482251 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-212ENST00000482251 NOD1Q9Y239 953 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 STXBP5LQ9Y2K9 1186 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 DOCK5Q9H7D0 1870 aa12.1□□□□□ -0.47
CPSF4-212ENST00000482251 MYH7BA7E2Y1 1941 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 KPNA6O60684 536 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 GGPS1O95749 300 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 PBX2P40425 430 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 TRAF1Q13077 416 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 DEFB128Q7Z7B8 93 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
CPSF4-212ENST00000482251 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 KAT2BQ92831 832 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
CPSF4-212ENST00000482251 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-212ENST00000482251 GBF1Q92538 1859 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 ZBBXA8MT70 800 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SUPT20HL2P0C7V6 817 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CALM1P0DP23 149 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CALM2P0DP24 149 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CALM3P0DP25 149 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CPA1P15085 419 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
CPSF4-212ENST00000482251 LIFRP42702 1097 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 GNAQP50148 359 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SP2Q02086 613 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 PTGISQ16647 500 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 DGKDQ16760 1214 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 UBE2SQ16763 222 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 GDF6Q6KF10 455 aaPredicted RBP12.08□□□□□ -0.48
CPSF4-212ENST00000482251 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SLC17A8Q8NDX2 589 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CUL5Q93034 780 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 MAP3K14Q99558 947 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CDX2Q99626 313 aaPredicted RBP12.08□□□□□ -0.48
CPSF4-212ENST00000482251 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SEZ6LQ9BYH1 1024 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
CPSF4-212ENST00000482251 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 CNTNAP5Q8WYK1 1306 aa12.08□□□□□ -0.48
CPSF4-212ENST00000482251 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-212ENST00000482251 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-212ENST00000482251 FGBP02675 491 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 PSEN2P49810 448 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
CPSF4-212ENST00000482251 SP4Q02446 784 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 LAMC2Q13753 1193 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 MFSD10Q14728 455 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 KIAA0753Q2KHM9 967 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms