RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 CLEC4DQ8WXI8 215 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 CSADQ9Y600 493 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 ESPNB1AK53 854 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 BCRP11274 1271 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 MUTP22033 750 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 EPHX2P34913 555 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-205ENST00000482013 GPR162Q16538 588 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 PRR16Q569H4 304 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-205ENST00000482013 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 RAD54LQ92698 747 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 LENG9Q96B70 501 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
GGPS1-205ENST00000482013 PTPRFP10586 1907 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 COL11A1P12107 1806 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-205ENST00000482013 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 POTEMA6NI47 508 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 FAM86B1E9PN63 330 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 KLRC4O43908 158 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 FAM86B2P0C5J1 330 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 ALAS1P13196 640 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 HMGCS2P54868 508 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 STIM1Q13586 685 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-205ENST00000482013 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
GGPS1-205ENST00000482013 STAMQ92783 540 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
GGPS1-205ENST00000482013 BLOC1S4Q9NUP1 217 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
GGPS1-205ENST00000482013 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 MEIS1O00470 390 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 CXCL11O14625 94 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 MSH4O15457 936 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 RPA1P27694 616 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
GGPS1-205ENST00000482013 FANCCQ00597 558 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 PPATQ06203 517 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 PSMD2Q13200 908 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 VGLL4Q14135 290 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 CEP55Q53EZ4 464 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 PROCA1Q8NCQ7 364 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-205ENST00000482013 ATG4CQ96DT6 458 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 PLIN2Q99541 437 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-205ENST00000482013 HSD3B7Q9H2F3 369 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 IMPACTQ9P2X3 320 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 RWDD2AQ9UIY3 292 aa13.11□□□□□ -0.31
GGPS1-205ENST00000482013 LOC285556D6RIA3 1793 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 ADM5C9JUS6 153 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 PSMD10O75832 226 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 ZNF18P17022 549 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 MSNP26038 577 aaKnown RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 CASP1P29466 404 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 PPP2R5CQ13362 524 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 DRC7Q8IY82 874 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 LRRC15Q8TF66 581 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 SLC5A5Q92911 643 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 TRERF1Q96PN7 1200 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 RIT2Q99578 217 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 MXRA8Q9BRK3 442 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-205ENST00000482013 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
GGPS1-205ENST00000482013 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms