RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SEC63Q9UGP8 760 aaKnown RBP12.21□□□□□ -0.45
SSBP1-210ENST00000481508 MEIS2O14770 477 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 SEPT4O43236 478 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 IFNAR1P17181 557 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 EIF2AK2P19525 551 aaKnown RBP12.2□□□□□ -0.46
SSBP1-210ENST00000481508 ACVR2BQ13705 512 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 GJC2Q5T442 439 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-210ENST00000481508 TAPT1Q6NXT6 567 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 USP17L6PQ6QN14 398 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 MCF2L2Q86YR7 1114 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 CNPY2Q9Y2B0 182 aa12.2□□□□□ -0.46
SSBP1-210ENST00000481508 LTBP2Q14767 1821 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 MYADML2A6NDP7 307 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 ASB14A6NK59 587 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 GCOM1H8Y6P7 765 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-210ENST00000481508 PRPF3O43395 683 aaKnown RBP12.19□□□□□ -0.46
SSBP1-210ENST00000481508 PFKFB2O60825 505 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 CD2BP2O95400 341 aaKnown RBP12.19□□□□□ -0.46
SSBP1-210ENST00000481508 TFRCP02786 760 aaKnown RBP12.19□□□□□ -0.46
SSBP1-210ENST00000481508 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 PFKFB3Q16875 520 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-210ENST00000481508 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 FCHSD1Q86WN1 690 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 PXMP2Q9NR77 195 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
SSBP1-210ENST00000481508 FRMPD4Q14CM0 1322 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 ARIH2O95376 493 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 PGK1P00558 417 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 SCG2P13521 617 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 MAGEA10P43363 369 aaPredicted RBP12.18□□□□□ -0.46
SSBP1-210ENST00000481508 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 LRIT3Q3SXY7 679 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 DNERQ8NFT8 737 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 PDCD2LQ9BRP1 358 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 RNF26Q9BY78 433 aaPredicted RBP12.18□□□□□ -0.46
SSBP1-210ENST00000481508 SLKQ9H2G2 1235 aaPredicted RBP12.18□□□□□ -0.46
SSBP1-210ENST00000481508 ABHD16BQ9H3Z7 469 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
SSBP1-210ENST00000481508 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
SSBP1-210ENST00000481508 SYNRGQ9UMZ2 1314 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 PIK3CDO00329 1044 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 CTAGE5O15320 804 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 RGS20O76081 388 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 AKR1A1P14550 325 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 SMPD1P17405 629 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 BMP8BP34820 402 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 NAPAP54920 295 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 PDE4DQ08499 809 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 PGM5Q15124 567 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 ANKRD1Q15327 319 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 TDHQ8IZJ6 230 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 NSUN6Q8TEA1 469 aaKnown RBP12.17□□□□□ -0.46
SSBP1-210ENST00000481508 COPS5Q92905 334 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 PAWRQ96IZ0 340 aaKnown RBP12.17□□□□□ -0.46
SSBP1-210ENST00000481508 MAF1Q9H063 256 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 FAM184BQ9ULE4 1060 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
SSBP1-210ENST00000481508 MYO9BQ13459 2157 aa12.17□□□□□ -0.46
SSBP1-210ENST00000481508 RBM47A0AV96 593 aaKnown RBP12.16□□□□□ -0.46
SSBP1-210ENST00000481508 JAK2O60674 1132 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 NR3C2P08235 984 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 MYCLP12524 364 aaPredicted RBP12.16□□□□□ -0.46
SSBP1-210ENST00000481508 PLA2G5P39877 138 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
SSBP1-210ENST00000481508 ADCY7P51828 1080 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 TRAF1Q13077 416 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 LRRC41Q15345 812 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 XPNPEP3Q9NQH7 507 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
SSBP1-210ENST00000481508 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
SSBP1-210ENST00000481508 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 SMCO2A6NFE2 343 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 POTEMA6NI47 508 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 CPLX1O14810 134 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 MSCO60682 206 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 RARBP10826 455 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
SSBP1-210ENST00000481508 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
SSBP1-210ENST00000481508 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
SSBP1-210ENST00000481508 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms