RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 STXBP2Q15833 593 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 PHKBQ93100 1093 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 IWS1Q96ST2 819 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 TMEM260Q9NX78 707 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 SEC63Q9UGP8 760 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-207ENST00000481260 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 STXBP3O00186 592 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 ARVCFO00192 962 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 CLTBP09497 229 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 FGD1P98174 961 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 TTLL4Q14679 1199 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 Q9Y3F1 56 aa13.15□□□□□ -0.3
RAPGEF1-207ENST00000481260 ELP1O95163 1332 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 A0A0U1RQG5 324 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 A6NJR5 290 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 B4GALT4O60513 344 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 MMP3P08254 477 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 NTRK3Q16288 839 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 PKN1Q16512 942 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 KAT2BQ92831 832 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 UBE2OQ9C0C9 1292 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 TMEM39AQ9NV64 488 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 MRVI1Q9Y6F6 885 aa13.14□□□□□ -0.31
RAPGEF1-207ENST00000481260 NID2Q14112 1375 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 PIK3CDO00329 1044 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 CD4P01730 458 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 ZNF286BP0CG31 522 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 CCND2P30279 289 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 BMP8BP34820 402 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 STK3Q13188 491 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 HIC1Q14526 733 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 MAF1Q9H063 256 aa13.13□□□□□ -0.31
RAPGEF1-207ENST00000481260 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 ATP9AO75110 1047 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 GGPS1O95749 300 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 GH1P01241 217 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CYP2C9P11712 490 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 PSMA5P28066 241 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CYP2C18P33260 490 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 NAPAP54920 295 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 EVCP57679 992 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 SHHQ15465 462 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 CDH23Q9H251 3354 aa13.12□□□□□ -0.31
RAPGEF1-207ENST00000481260 B4DLN1 442 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms