RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 MRPS27Q92552 414 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 DRC3Q9H069 523 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 SAMSN1Q9NSI8 373 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 MARCH6O60337 910 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 KRT14P02533 472 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 FOSL1P15407 271 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 TMPOP42166 694 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 PDE6CP51160 858 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 ADARP55265 1226 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 NCALDP61601 193 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 MTF1Q14872 753 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 GSTA3Q16772 222 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 LARP1Q6PKG0 1096 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 ALDH8A1Q9H2A2 487 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 ATAD3AQ9NVI7 634 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 FAIMQ9NVQ4 179 aa11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 TTC7AQ9ULT0 858 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-206ENST00000481109 STRNO43815 780 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 ADD1P35611 737 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 CPLX4Q7Z7G2 160 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 RNF10Q8N5U6 811 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 ESX1Q8N693 406 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 RBBP8NLQ8NC74 664 aaPredicted RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 ASAP3Q8TDY4 903 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 CASP10Q92851 521 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 OLFM3Q96PB7 478 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 LSG1Q9H089 658 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 TBC1D30Q9Y2I9 924 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 MROH1Q8NDA8 1641 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 LGR5O75473 907 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 SLC3A2P08195 630 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 RAB15P59190 212 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 KCNJ2P63252 427 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 BIRC3Q13489 604 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 NEK10Q6ZWH5 1172 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 CENPKQ9BS16 269 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 RAB17Q9H0T7 212 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
PRPF4B-206ENST00000481109 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 TACC1O75410 805 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 SERPINB7O75635 380 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ZMYND10O75800 440 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 TJP3O95049 919 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ASMTLO95671 621 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 DDB1Q16531 1140 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 DEPDC1Q5TB30 811 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 PIGWQ7Z7B1 504 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 GATA6Q92908 595 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 KRT23Q9C075 422 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 CCPG1Q9ULG6 757 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ITIH6Q6UXX5 1313 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 CHGBP05060 677 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 RARAP10276 462 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 BOLA3Q53S33 107 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 CHMP6Q96FZ7 201 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 C19orf44Q9H6X5 657 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 PARVBQ9HBI1 364 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms