RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 NOC4LQ9BVI4 516 aaKnown RBP17.24■□□□□ 0.35
LIMS4-202ENST00000480598 SPZ1Q9BXG8 430 aa17.24■□□□□ 0.35
LIMS4-202ENST00000480598 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
LIMS4-202ENST00000480598 DDX41Q9UJV9 622 aaKnown RBP17.24■□□□□ 0.35
LIMS4-202ENST00000480598 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
LIMS4-202ENST00000480598 KPNA6O60684 536 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 RGS20O76081 388 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 CYP2C9P11712 490 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 LIFRP42702 1097 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 CHMP4BP1P59074 171 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 SMAD3P84022 425 aaKnown RBP17.23■□□□□ 0.35
LIMS4-202ENST00000480598 PGM5Q15124 567 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 ZNF697Q5TEC3 545 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 RNF20Q5VTR2 975 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
LIMS4-202ENST00000480598 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 SAMD3Q8N6K7 520 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 RRP36Q96EU6 259 aaKnown RBP17.23■□□□□ 0.35
LIMS4-202ENST00000480598 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
LIMS4-202ENST00000480598 SORBS3O60504 671 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 GNAQP50148 359 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 GUCD1Q96NT3 240 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 NEK1Q96PY6 1258 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
LIMS4-202ENST00000480598 hCG_1642624A0A1W2PR95 340 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 CCND2P30279 289 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.35
LIMS4-202ENST00000480598 SCLYQ96I15 445 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 IL23AQ9NPF7 189 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
LIMS4-202ENST00000480598 STXBP5LQ9Y2K9 1186 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
LIMS4-202ENST00000480598 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 CALM1P0DP23 149 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 CALM2P0DP24 149 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 CALM3P0DP25 149 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
LIMS4-202ENST00000480598 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 DHX37Q8IY37 1157 aaKnown RBP17.2■□□□□ 0.34
LIMS4-202ENST00000480598 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 KAT2BQ92831 832 aa17.2■□□□□ 0.34
LIMS4-202ENST00000480598 EMID1Q96A84 441 aaPredicted RBP17.2■□□□□ 0.34
LIMS4-202ENST00000480598 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
LIMS4-202ENST00000480598 CASTP20810 708 aaKnown RBP17.19■□□□□ 0.34
LIMS4-202ENST00000480598 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
LIMS4-202ENST00000480598 SP2Q02086 613 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 DGKDQ16760 1214 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 RASIP1Q5U651 963 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 FANCBQ8NB91 859 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 SEMA6BQ9H3T3 888 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 FRMPD4Q14CM0 1322 aa17.19■□□□□ 0.34
LIMS4-202ENST00000480598 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 MEIS2O14770 477 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 GGPS1O95749 300 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 ZNF286BP0CG31 522 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 MRPS9P82933 396 aaKnown RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 CELF3Q5SZQ8 465 aaKnown RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 MYSM1Q5VVJ2 828 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 PPTC7Q8NI37 304 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 CXXC1Q9P0U4 656 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-202ENST00000480598 SCN5AQ14524 2016 aa17.18■□□□□ 0.34
LIMS4-202ENST00000480598 FGBP02675 491 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 DNAJB2P25686 324 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 HSDL1Q3SXM5 330 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
LIMS4-202ENST00000480598 KCNV1Q6PIU1 500 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 CUL5Q93034 780 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 BCAS3Q9H6U6 928 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
LIMS4-202ENST00000480598 PIK3CDO00329 1044 aa17.16■□□□□ 0.34
LIMS4-202ENST00000480598 F2P00734 622 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms