RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ANKRD1Q15327 319 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 CDC37Q16543 378 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 QRICH1Q2TAL8 776 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 USH1GQ495M9 461 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 GNASQ5JWF2 1037 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 PCSK9Q8NBP7 692 aaKnown RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 ZNF274Q96GC6 653 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 GLT1D1Q96MS3 346 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 PIGSQ96S52 555 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 ALDH8A1Q9H2A2 487 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 RANBP17Q9H2T7 1088 aaKnown RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 CCPG1Q9ULG6 757 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 NCOR1O75376 2440 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 KIAA1217Q5T5P2 1943 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 SMPD1P17405 629 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 GNAQP50148 359 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 EVCP57679 992 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 TNFAIP2Q03169 654 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.737e-9■□□□□ 8.7
VCP-206ENST00000480327 ME3Q16798 604 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 TAPT1Q6NXT6 567 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 CXCL17Q6UXB2 119 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 NECAB1Q8N987 351 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 LZTS2Q9BRK4 669 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 SLKQ9H2G2 1235 aaPredicted RBP10.47□□□□□ -0.73
VCP-206ENST00000480327 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 ACAD9Q9H845 621 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 MROH7Q68CQ1 1323 aa10.47□□□□□ -0.73
VCP-206ENST00000480327 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 ZBTB5O15062 677 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 ST18O60284 1047 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.73
VCP-206ENST00000480327 ICAM1P05362 532 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 FDX1P10109 184 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 SCRN1Q12765 414 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 TLK2Q86UE8 772 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 FBXO11Q86XK2 927 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 PHKBQ93100 1093 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 RRP36Q96EU6 259 aaKnown RBP10.46□□□□□ -0.73
VCP-206ENST00000480327 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 SPZ1Q9BXG8 430 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 TRPV6Q9H1D0 765 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 WNT8AQ9H1J5 351 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 IL23AQ9NPF7 189 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.73
VCP-206ENST00000480327 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.73
VCP-206ENST00000480327 V9GY48 417 aaPredicted RBP10.46□□□□□ -0.73
VCP-206ENST00000480327 COL4A4P53420 1690 aaPredicted RBP10.45□□□□□ -0.74
VCP-206ENST00000480327 CNTNAP5Q8WYK1 1306 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 PNMA6FA0A0J9YX94 578 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 RBAK-RBAKDNI3L0D1 243 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 CPLX1O14810 134 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 PFKFB2O60825 505 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 PPP1R11O60927 126 aaPredicted RBP10.45□□□□□ -0.74
VCP-206ENST00000480327 RCAN1P53805 252 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 PSMC6P62333 389 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 FUT2Q10981 343 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 FBXO16Q8IX29 292 aaPredicted RBP10.45□□□□□ -0.74
VCP-206ENST00000480327 MORC4Q8TE76 937 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
VCP-206ENST00000480327 SLC26A6Q9BXS9 759 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 SEC63Q9UGP8 760 aaKnown RBP10.45□□□□□ -0.74
VCP-206ENST00000480327 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 MYH7BA7E2Y1 1941 aa10.45□□□□□ -0.74
VCP-206ENST00000480327 NID2Q14112 1375 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 PRRC2BQ5JSZ5 2229 aaKnown RBP10.44□□□□□ -0.74
VCP-206ENST00000480327 DYNC1LI2O43237 492 aaPredicted RBP10.44□□□□□ -0.74
VCP-206ENST00000480327 B4GALT4O60513 344 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 SMARCA1P28370 1054 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 PPP2R5BQ15173 497 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 NTRK3Q16288 839 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 FSCN1Q16658 493 aaKnown RBP10.44□□□□□ -0.74
VCP-206ENST00000480327 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
VCP-206ENST00000480327 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 CCDC83Q8IWF9 413 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 TMEM199Q8N511 208 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 GPKOWQ92917 476 aaPredicted RBP eCLIP10.44□□□□□ -0.74
VCP-206ENST00000480327 MTMR8Q96EF0 704 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 AMNQ9BXJ7 453 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 SPC25Q9HBM1 224 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 PCDHA1Q9Y5I3 950 aa10.44□□□□□ -0.74
VCP-206ENST00000480327 ASB14A6NK59 587 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 NFIBO00712 420 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms