RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 TBC1D25Q3MII6 688 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 SLC30A9Q6PML9 568 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 CREG2Q8IUH2 290 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 SPATA4Q8NEY3 305 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 RTFDC1Q9BY42 306 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 DUOX1Q9NRD9 1551 aa12□□□□□ -0.49
CHD6-208ENST00000480022 C6orf229H3BNL8 230 aa12□□□□□ -0.49
CHD6-208ENST00000480022 ADORA1P30542 326 aa12□□□□□ -0.49
CHD6-208ENST00000480022 PPP1R7Q15435 360 aa12□□□□□ -0.49
CHD6-208ENST00000480022 KRT40Q6A162 431 aa12□□□□□ -0.49
CHD6-208ENST00000480022 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
CHD6-208ENST00000480022 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
CHD6-208ENST00000480022 RPS6KL1Q9Y6S9 549 aa12□□□□□ -0.49
CHD6-208ENST00000480022 CACNA1SQ13698 1873 aa12□□□□□ -0.49
CHD6-208ENST00000480022 RTN3O95197 1032 aaPredicted RBP12□□□□□ -0.49
CHD6-208ENST00000480022 SLC5A1P13866 664 aa12□□□□□ -0.49
CHD6-208ENST00000480022 MRPS25P82663 173 aaKnown RBP12□□□□□ -0.49
CHD6-208ENST00000480022 RIPK1Q13546 671 aa12□□□□□ -0.49
CHD6-208ENST00000480022 KRT31Q15323 416 aa12□□□□□ -0.49
CHD6-208ENST00000480022 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
CHD6-208ENST00000480022 LIMA1Q9UHB6 759 aaKnown RBP12□□□□□ -0.49
CHD6-208ENST00000480022 SNX12Q9UMY4 172 aa12□□□□□ -0.49
CHD6-208ENST00000480022 UTRNP46939 3433 aa12□□□□□ -0.49
CHD6-208ENST00000480022 LTBP1Q14766 1721 aa12□□□□□ -0.49
CHD6-208ENST00000480022 IRS2Q9Y4H2 1338 aa12□□□□□ -0.49
CHD6-208ENST00000480022 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 MATR3P43243 847 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHD6-208ENST00000480022 QPCTQ16769 361 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 FKBP15Q5T1M5 1219 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 HAUS3Q68CZ6 603 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 CCT6BQ92526 530 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 TSPAN18Q96SJ8 248 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 NOP53Q9NZM5 478 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 C5orf60A6NFR6 353 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 NFKBIEO00221 500 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 HPDP32754 393 aaPredicted RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHD6-208ENST00000480022 PPARAQ07869 468 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 CWF19L1Q69YN2 538 aaKnown RBP11.99□□□□□ -0.49
CHD6-208ENST00000480022 KLHL23Q8NBE8 558 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 ZNF570Q96NI8 536 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 DBNDD2Q9BQY9 259 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 VPS16Q9H269 839 aa11.99□□□□□ -0.49
CHD6-208ENST00000480022 ACTN4O43707 911 aaKnown RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 HSPD1P10809 573 aaKnown RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 C8orf74Q6P047 294 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 IFT20Q8IY31 132 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 MREGQ8N565 214 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 HAUS7Q99871 368 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 A0A1B0GUL6 1792 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 LRRC10BA6NIK2 292 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 PPIP5K2O43314 1243 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 SPAG1Q07617 926 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 BLMHQ13867 455 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 GKAP1Q5VSY0 366 aaPredicted RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 C15orf52Q6ZUT6 534 aaKnown RBP11.98□□□□□ -0.49
CHD6-208ENST00000480022 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 SUPT20HQ8NEM7 779 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 PIK3R5Q8WYR1 880 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 PCDHGC5Q9Y5F6 944 aa11.98□□□□□ -0.49
CHD6-208ENST00000480022 GOLGA6L10A6NI86 522 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 PRC1O43663 620 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 LINGO3P0C6S8 592 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 FERP16591 822 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 CDC25CP30307 473 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 CYLC1P35663 651 aaPredicted RBP11.97□□□□□ -0.49
CHD6-208ENST00000480022 GYG1P46976 350 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 PAPOLAP51003 745 aaKnown RBP11.97□□□□□ -0.49
CHD6-208ENST00000480022 PAK2Q13177 524 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 MTA1Q13330 715 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 GPR162Q16538 588 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 WASHC4Q2M389 1173 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 ARHGAP27Q6ZUM4 889 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 EYA3Q99504 573 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 LACRTQ9GZZ8 138 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 TAOK3Q9H2K8 898 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
CHD6-208ENST00000480022 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 L3MBTL1Q9Y468 752 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 PTPREP23469 700 aa11.97□□□□□ -0.49
CHD6-208ENST00000480022 BCAMP50895 628 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms