RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 TRANK1O15050 2925 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 PRPF3O43395 683 aaKnown RBP10.28□□□□□ -0.76
DDX56-211ENST00000479602 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
DDX56-211ENST00000479602 CPA1P15085 419 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 CSF2RAP15509 400 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 EDNRBP24530 442 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 BEX3Q00994 111 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 APOBRQ0VD83 1088 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 CUL4AQ13619 759 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 CCDC96Q2M329 555 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 SLC35G1Q2M3R5 365 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 TTBK2Q6IQ55 1244 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 CXCL17Q6UXB2 119 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 ADGRF4Q8IZF3 695 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 MAFAQ8NHW3 353 aaPredicted RBP10.28□□□□□ -0.76
DDX56-211ENST00000479602 HERVK_113Q902F9 699 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
DDX56-211ENST00000479602 PBX4Q9BYU1 374 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 SH3GLB2Q9NR46 395 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 ABCB11O95342 1321 aa10.28□□□□□ -0.76
DDX56-211ENST00000479602 XIRP2A4UGR9 3374 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 DNAJB2P25686 324 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 CDC27P30260 824 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 SNAP25P60880 206 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 HMGN5P82970 282 aaKnown RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 PPIGQ13427 754 aaKnown RBP eCLIP10.27□□□□□ -0.775e-8■□□□□ 10.9
DDX56-211ENST00000479602 ITGA7Q13683 1181 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 FSCN1Q16658 493 aaKnown RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 DUSP28Q4G0W2 176 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 MCTP2Q6DN12 878 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 GALNT17Q6IS24 598 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 STAG2Q8N3U4 1231 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 SRBD1Q8N5C6 995 aaKnown RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 SMARCC2Q8TAQ2 1214 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 TCEANC2Q96MN5 208 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 AMNQ9BXJ7 453 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 ZNF576Q9H609 170 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 VTA1Q9NP79 307 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 IL23AQ9NPF7 189 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 CXXC1Q9P0U4 656 aaPredicted RBP10.27□□□□□ -0.77
DDX56-211ENST00000479602 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
DDX56-211ENST00000479602 MCM3APO60318 1980 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 DEXIO95424 95 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 ALAS1P13196 640 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 PBX2P40425 430 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 SCRN1Q12765 414 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 BAATQ14032 418 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 CDC37Q16543 378 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 ME3Q16798 604 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 PFKFB3Q16875 520 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 QRICH1Q2TAL8 776 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 TMEM199Q8N511 208 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 CCDC12Q8WUD4 166 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 SLKQ9H2G2 1235 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
DDX56-211ENST00000479602 UMODL1Q5DID0 1318 aa10.26□□□□□ -0.77
DDX56-211ENST00000479602 A6NJR5 290 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 NFIBO00712 420 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 B4GALT4O60513 344 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 PLEKHA8P1O95397 391 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 ACRP10323 421 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 CYP2C18P33260 490 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 SLC16A2P36021 539 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 HSD17B4P51659 736 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 ADGRE1Q14246 886 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
DDX56-211ENST00000479602 CCDC174Q6PII3 467 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 TLK2Q86UE8 772 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 DAGLBQ8NCG7 672 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 WASF1Q92558 559 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 TIFAQ96CG3 184 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 TRPV6Q9H1D0 765 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 BARHL2Q9NY43 387 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 SEC63Q9UGP8 760 aaKnown RBP10.25□□□□□ -0.77
DDX56-211ENST00000479602 CCPG1Q9ULG6 757 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 MRPL11Q9Y3B7 192 aaKnown RBP10.25□□□□□ -0.77
DDX56-211ENST00000479602 KIF3AQ9Y496 699 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 BAZ2BQ9UIF8 2168 aaKnown RBP10.25□□□□□ -0.77
DDX56-211ENST00000479602 LCTP09848 1927 aa10.25□□□□□ -0.77
DDX56-211ENST00000479602 LRRC37A2A6NM11 1700 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 CPLX1O14810 134 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 TLR3O15455 904 aaKnown RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 FGBP02675 491 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms