RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 H2AFZP0C0S5 128 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 H2AFVQ71UI9 128 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 DPH6Q7L8W6 267 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 FBXO33Q7Z6M2 555 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 ATP2A1O14983 1001 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 SEPT2Q15019 361 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 SBK1Q52WX2 424 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 XKR9Q5GH70 373 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 LRRC45Q96CN5 670 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 GJD4Q96KN9 370 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 ANO3Q9BYT9 981 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 IQCGQ9H095 443 aaKnown RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 UTP11Q9Y3A2 253 aaKnown RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 K7ENM7 598 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 MEIS1O00470 390 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PLA2G4BP0C869 781 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 ABCB4P21439 1286 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PRCPP42785 496 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 CRKP46108 304 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 MAP3K9P80192 1104 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 SETDB1Q15047 1291 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 ARHGEF16Q5VV41 709 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 TMEM179Q6ZVK1 233 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 DAAM2Q86T65 1068 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PNMA8AQ86V59 439 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 EMILIN3Q9NT22 766 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 STAT2P52630 851 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 MB21D1Q8N884 522 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 NDST4Q9H3R1 872 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 ZBTB5O15062 677 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 VPS72Q15906 364 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 STIM2Q9P246 746 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 BCS1LQ9Y276 419 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 KCNK3O14649 394 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 RASSF7Q02833 373 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 NCBP1Q09161 790 aaKnown RBP15.72■□□□□ 0.11
COL20A1-206ENST00000479501 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 MSANTD4Q8NCY6 345 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
COL20A1-206ENST00000479501 AMFRQ9UKV5 643 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 IFT172Q9UG01 1749 aa15.72■□□□□ 0.11
COL20A1-206ENST00000479501 LRRC63Q05C16 580 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 FAM102BQ5T8I3 360 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 KCNG1Q9UIX4 513 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 TRIM49BA6NDI0 452 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 POTEMA6NI47 508 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 PP2D1A8MPX8 630 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 NOP56O00567 594 aaKnown RBP15.71■□□□□ 0.11
COL20A1-206ENST00000479501 GNPTABQ3T906 1256 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 BARGINQ6ZT62 677 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 CCDC170Q8IYT3 715 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 ZNF577Q9BSK1 485 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 AS3MTQ9HBK9 375 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 CCDC160A6NGH7 325 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 PLEKHA4Q9H4M7 779 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 PNMA2Q9UL42 364 aa15.71■□□□□ 0.11
COL20A1-206ENST00000479501 GH2P01242 217 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 HOXA7P31268 230 aaPredicted RBP15.71■□□□□ 0.1
COL20A1-206ENST00000479501 PPARDQ03181 441 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 RUFY4Q6ZNE9 571 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 UNC13DQ70J99 1090 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 SPATA24Q86W54 205 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 KCNF1Q9H3M0 494 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.1
COL20A1-206ENST00000479501 USP27XA6NNY8 438 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 CYP27A1Q02318 531 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 LIN9Q5TKA1 542 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 FAM170AA1A519 330 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 TEX33O43247 280 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 GAP43P17677 238 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 USP49Q70CQ1 688 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 SMC6Q96SB8 1091 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 FERMT1Q9BQL6 677 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 AZI2Q9H6S1 392 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 TNNI1P19237 187 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 TRPC3Q13507 836 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 SLC27A3Q5K4L6 730 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 AGXT2Q9BYV1 514 aa15.7■□□□□ 0.1
COL20A1-206ENST00000479501 BZW2Q9Y6E2 419 aaKnown RBP15.7■□□□□ 0.1
COL20A1-206ENST00000479501 LGALS16A8MUM7 142 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms