RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 DDX41Q9UJV9 622 aaKnown RBP20.58■□□□□ 0.89
HLA-A-206ENST00000479320 SLC12A7Q9Y666 1083 aa20.58■□□□□ 0.89
HLA-A-206ENST00000479320 CSF2RAP15509 400 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 CYP2C18P33260 490 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 EXOSC10Q01780 885 aaKnown RBP20.57■□□□□ 0.88
HLA-A-206ENST00000479320 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 VSIG10LQ86VR7 867 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 SGMS1Q86VZ5 419 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 FCHSD1Q86WN1 690 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 RAB11FIP4Q86YS3 637 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 CMTR1Q8N1G2 835 aaKnown RBP20.57■□□□□ 0.88
HLA-A-206ENST00000479320 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
HLA-A-206ENST00000479320 RGS20O76081 388 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 PPIGQ13427 754 aaKnown RBP eCLIP20.56■□□□□ 0.88
HLA-A-206ENST00000479320 NBPF20Q3BBV1 942 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 C16orf59Q7L2K0 433 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 FANCBQ8NB91 859 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 RNPC3Q96LT9 517 aaKnown RBP20.56■□□□□ 0.88
HLA-A-206ENST00000479320 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
HLA-A-206ENST00000479320 HIPK3Q9H422 1215 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 SEC63Q9UGP8 760 aaKnown RBP20.56■□□□□ 0.88
HLA-A-206ENST00000479320 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 UMODL1Q5DID0 1318 aa20.56■□□□□ 0.88
HLA-A-206ENST00000479320 DHX32Q7L7V1 743 aaKnown RBP20.55■□□□□ 0.88
HLA-A-206ENST00000479320 PPP1R13LQ8WUF5 828 aa20.55■□□□□ 0.88
HLA-A-206ENST00000479320 ZFP91Q96JP5 570 aaPredicted RBP20.55■□□□□ 0.88
HLA-A-206ENST00000479320 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
HLA-A-206ENST00000479320 NOC4LQ9BVI4 516 aaKnown RBP20.55■□□□□ 0.88
HLA-A-206ENST00000479320 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
HLA-A-206ENST00000479320 MMP3P08254 477 aa20.54■□□□□ 0.88
HLA-A-206ENST00000479320 CCND2P30279 289 aa20.54■□□□□ 0.88
HLA-A-206ENST00000479320 FAM47CQ5HY64 1035 aa20.54■□□□□ 0.88
HLA-A-206ENST00000479320 FAM109BQ6ICB4 259 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-206ENST00000479320 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
HLA-A-206ENST00000479320 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
HLA-A-206ENST00000479320 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-206ENST00000479320 TRMT13Q9NUP7 481 aaKnown RBP20.54■□□□□ 0.88
HLA-A-206ENST00000479320 SUPT20HL2P0C7V6 817 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 ACRP10323 421 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 CASTP20810 708 aaKnown RBP20.53■□□□□ 0.88
HLA-A-206ENST00000479320 SMAD3P84022 425 aaKnown RBP20.53■□□□□ 0.88
HLA-A-206ENST00000479320 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 KRT32Q14532 448 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 KCNV1Q6PIU1 500 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 APOA5Q6Q788 366 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 SYNE3Q6ZMZ3 975 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 TMTC3Q6ZXV5 915 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 DHX37Q8IY37 1157 aaKnown RBP20.53■□□□□ 0.88
HLA-A-206ENST00000479320 hCG_1642624A0A1W2PR95 340 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 MEIS2O14770 477 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 CYP2C9P11712 490 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 CCL23P55773 120 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
HLA-A-206ENST00000479320 USP17L6PQ6QN14 398 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 IL23AQ9NPF7 189 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
HLA-A-206ENST00000479320 FRMPD4Q14CM0 1322 aa20.52■□□□□ 0.88
HLA-A-206ENST00000479320 TGFB3P10600 412 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 CHMP4BP1P59074 171 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 MRPS9P82933 396 aaKnown RBP20.52■□□□□ 0.87
HLA-A-206ENST00000479320 SP2Q02086 613 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 DGKDQ16760 1214 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 MYSM1Q5VVJ2 828 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 ZNF365Q70YC5 407 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 KAT2BQ92831 832 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 GPKOWQ92917 476 aaPredicted RBP eCLIP20.52■□□□□ 0.87
HLA-A-206ENST00000479320 KCNB2Q92953 911 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 CUL5Q93034 780 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 WNT8AQ9H1J5 351 aa20.52■□□□□ 0.87
HLA-A-206ENST00000479320 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
HLA-A-206ENST00000479320 HMGB1P09429 215 aaKnown RBP20.51■□□□□ 0.87
HLA-A-206ENST00000479320 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
HLA-A-206ENST00000479320 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
HLA-A-206ENST00000479320 COL6A3P12111 3177 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-206ENST00000479320 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-206ENST00000479320 ZBTB43O43298 467 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 SORBS3O60504 671 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 GGPS1O95749 300 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 HSPA4P34932 840 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 ZNF697Q5TEC3 545 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 RASIP1Q5U651 963 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 PSRC1Q6PGN9 363 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-206ENST00000479320 SCLYQ96I15 445 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 FAM161BQ96MY7 647 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 PSTPIP2Q9H939 334 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
HLA-A-206ENST00000479320 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
HLA-A-206ENST00000479320 STAM2O75886 525 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 FGBP02675 491 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 CPA1P15085 419 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 UBA1P22314 1058 aaKnown RBP20.49■□□□□ 0.87
HLA-A-206ENST00000479320 HSDL1Q3SXM5 330 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 SESTD1Q86VW0 696 aa20.49■□□□□ 0.87
HLA-A-206ENST00000479320 INPP4AQ96PE3 977 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms