RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-237ENST00000479169 CDC37Q16543 378 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-237ENST00000479169 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-237ENST00000479169 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
HDLBP-237ENST00000479169 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 FAM86C2PA6NEL3 165 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 B4DLN1 442 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 CKBP12277 381 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
HDLBP-237ENST00000479169 CNKSR3Q6P9H4 555 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 MFSD6Q6ZSS7 791 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 WNT8BQ93098 351 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 TTC14Q96N46 770 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 HDAC6Q9UBN7 1215 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
HDLBP-237ENST00000479169 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 DOCK5Q9H7D0 1870 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 CXCL10P02778 98 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 ZNF286BP0CG31 522 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
HDLBP-237ENST00000479169 PSEN2P49810 448 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
HDLBP-237ENST00000479169 FAM117BQ6P1L5 589 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 ALG1Q9BT22 464 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 CD320Q9NPF0 282 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 C11orf16Q9NQ32 467 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-237ENST00000479169 NLRC5Q86WI3 1866 aa12.89□□□□□ -0.35
HDLBP-237ENST00000479169 ABCB11O95342 1321 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 SORBS3O60504 671 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 GJB5O95377 273 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
HDLBP-237ENST00000479169 ERVK-21P61565 698 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 ZNF200P98182 395 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-237ENST00000479169 RBL2Q08999 1139 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 STXBP2Q15833 593 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 DGKDQ16760 1214 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
HDLBP-237ENST00000479169 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 NSUN6Q8TEA1 469 aaKnown RBP12.88□□□□□ -0.35
HDLBP-237ENST00000479169 RAD9AQ99638 391 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
HDLBP-237ENST00000479169 C5orf42Q9H799 3197 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
HDLBP-237ENST00000479169 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
HDLBP-237ENST00000479169 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-237ENST00000479169 HIC1Q14526 733 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 MFSD10Q14728 455 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 ESR2Q92731 530 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
HDLBP-237ENST00000479169 IWS1Q96ST2 819 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-237ENST00000479169 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-237ENST00000479169 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 PXMP2Q9NR77 195 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
HDLBP-237ENST00000479169 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 B4E1Z4 1266 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 HAS3O00219 553 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 DHX16O60231 1041 aaKnown RBP12.86□□□□□ -0.35
HDLBP-237ENST00000479169 KDM4AO75164 1064 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 PARNO95453 639 aaKnown RBP12.86□□□□□ -0.35
HDLBP-237ENST00000479169 F2P00734 622 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 PTK7Q13308 1070 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.86□□□□□ -0.353e-9■■■□□ 18.1
HDLBP-237ENST00000479169 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 DGKHQ86XP1 1220 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 RILPL2Q969X0 211 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 EMID1Q96A84 441 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-237ENST00000479169 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 MRVI1Q9Y6F6 885 aa12.86□□□□□ -0.35
HDLBP-237ENST00000479169 WDFY4Q6ZS81 3184 aa12.85□□□□□ -0.35
HDLBP-237ENST00000479169 OPLAHO14841 1288 aa12.85□□□□□ -0.35
HDLBP-237ENST00000479169 CFBP00751 764 aa12.85□□□□□ -0.35
HDLBP-237ENST00000479169 NR3C2P08235 984 aa12.85□□□□□ -0.35
HDLBP-237ENST00000479169 KCNA5P22460 613 aa12.85□□□□□ -0.35
HDLBP-237ENST00000479169 IKBKEQ14164 716 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms