RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 SPAG7O75391 227 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 TRAF1Q13077 416 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SCARA3Q6AZY7 606 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SBNO1A3KN83 1393 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 LRRC74AQ0VAA2 488 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SARS2Q9NP81 518 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 TMEM161AQ9NX61 479 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 IPO11Q9UI26 975 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 ATF2P15336 505 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 INTS9Q9NV88 658 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 ZNF644Q9H582 1327 aaPredicted RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SUZ12Q15022 739 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 EXOSC4Q9NPD3 245 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 POU5F1Q01860 360 aaKnown RBP11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SPAG1Q07617 926 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 STAMQ92783 540 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 CYP4F11Q9HBI6 524 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 ADA2Q9NZK5 511 aa11.89□□□□□ -0.51
EWSR1-216ENST00000479135 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CYP7A1P22680 504 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TPP2P29144 1249 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 HDAC4P56524 1084 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 HORMAD1Q86X24 394 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CHMP2BQ9UQN3 213 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 EFCAB8A8MWE9 144 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CCNYQ8ND76 341 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CASS4Q9NQ75 786 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TRAF3IP3Q9Y228 551 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TMOD1P28289 359 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TXKP42681 527 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 MYCT1Q8N699 235 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 SERPIND1P05546 499 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 MSL3Q8N5Y2 521 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TBATAQ96M53 351 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 SEMA3DO95025 777 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 BAG3O95817 575 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 USH1GQ495M9 461 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 DNAAF3Q8N9W5 541 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 ZNF148Q9UQR1 794 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 TRIP4Q15650 581 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 FAM161BQ96MY7 647 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 USP28Q96RU2 1077 aa11.88□□□□□ -0.51
EWSR1-216ENST00000479135 SPRTNQ9H040 489 aaPredicted RBP11.88□□□□□ -0.51
EWSR1-216ENST00000479135 GOLGA8KD6RF30 607 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 IMPG1Q17R60 797 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 RTL3Q8N8U3 475 aaKnown RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 MDM1Q8TC05 714 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 TRIM63Q969Q1 353 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KIFC1Q9BW19 673 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 REXO4Q9GZR2 422 aaKnown RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 RAB17Q9H0T7 212 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 GOLGA8CPA6NN73 597 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 SNX2O60749 519 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KRT16P08779 473 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KRT72Q14CN4 511 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 HIBCHQ6NVY1 386 aaPredicted RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 FRA10AC1Q70Z53 315 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 LSM14BQ9BX40 385 aaKnown RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 UPF3AQ9H1J1 476 aaKnown RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 SPTLC2O15270 562 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 MYBL1P10243 752 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 RRM2BQ7LG56 351 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KLHL25Q9H0H3 589 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 CYP19A1P11511 503 aaPredicted RBP11.87□□□□□ -0.51
EWSR1-216ENST00000479135 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 UBASH3BQ8TF42 649 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
EWSR1-216ENST00000479135 AURKCQ9UQB9 309 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms