RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CCNT1O60563 726 aaKnown RBP14.9□□□□□ -0.02
CHD3-210ENST00000479080 SLC39A14Q15043 492 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 Q4G0T1 1027 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 ARHGEF16Q5VV41 709 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 ATL3Q6DD88 541 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 NSUN6Q8TEA1 469 aaKnown RBP14.9□□□□□ -0.02
CHD3-210ENST00000479080 MTMR9Q96QG7 549 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 KCNMB3Q9NPA1 279 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 FLRT1Q9NZU1 646 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 FBXO2Q9UK22 296 aaPredicted RBP14.9□□□□□ -0.02
CHD3-210ENST00000479080 GABRQQ9UN88 632 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 MGAMO43451 1857 aa14.9□□□□□ -0.02
CHD3-210ENST00000479080 MEIS1O00470 390 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 HOXC6P09630 235 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 ARP10275 920 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 NCLP19338 710 aaKnown RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 PSMC4P43686 418 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 SP3Q02447 781 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 MAP2K5Q13163 448 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 PTGDRQ13258 359 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 AXDND1Q5T1B0 1012 aaPredicted RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 INPP4AQ96PE3 977 aaPredicted RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 MXRA8Q9BRK3 442 aa14.89□□□□□ -0.03
CHD3-210ENST00000479080 DDX25Q9UHL0 483 aaKnown RBP14.89□□□□□ -0.03
CHD3-210ENST00000479080 TCHHQ07283 1943 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 TNPO2O14787 897 aaKnown RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 MSH4O15457 936 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 NEMFO60524 1076 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 MYCLP12524 364 aaPredicted RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 GCFC2P16383 781 aaKnown RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 CCL14Q16627 93 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 CEP55Q53EZ4 464 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 ZNF296Q8WUU4 475 aaPredicted RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 CLIC6Q96NY7 704 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 IWS1Q96ST2 819 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 WDR11Q9BZH6 1224 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 EHMT1Q9H9B1 1298 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 JADE2Q9NQC1 790 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 IVNS1ABPQ9Y6Y0 642 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 PLXNA1Q9UIW2 1896 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 ELP1O95163 1332 aa14.88□□□□□ -0.03
CHD3-210ENST00000479080 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
CHD3-210ENST00000479080 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 SPTLC2O15270 562 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 SNAI1O95863 264 aaPredicted RBP14.87□□□□□ -0.03
CHD3-210ENST00000479080 CCND2P30279 289 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 MCM4P33991 863 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 FCGRTP55899 365 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 PRKCZQ05513 592 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 ITGB3BPQ13352 177 aaPredicted RBP14.87□□□□□ -0.03
CHD3-210ENST00000479080 STK38Q15208 465 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 PRR16Q569H4 304 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 TMEM63BQ5T3F8 832 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 MAMDC4Q6UXC1 1216 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 ARMCX2Q7L311 632 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 NIPA1Q7RTP0 329 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
CHD3-210ENST00000479080 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
CHD3-210ENST00000479080 SPATA32Q96LK8 384 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 BCAS3Q9H6U6 928 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 CFAP45Q9UL16 551 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 PCDHA7Q9UN72 937 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
CHD3-210ENST00000479080 TELO2Q9Y4R8 837 aa14.87□□□□□ -0.03
CHD3-210ENST00000479080 ATP9AO75110 1047 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 PPP6R2O75170 966 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 ARIH2O95376 493 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 OR52Z1P0C646 297 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 CYP2B6P20813 491 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 PTGS1P23219 599 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
CHD3-210ENST00000479080 SPIRE1Q08AE8 756 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 XRRA1Q6P2D8 792 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 B3GNT9Q6UX72 402 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 JMYQ8N9B5 988 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 SOCS4Q8WXH5 440 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 APBA2Q99767 749 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 NUDT12Q9BQG2 462 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 SCAND2PQ9GZW5 306 aaPredicted RBP14.86□□□□□ -0.03
CHD3-210ENST00000479080 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
CHD3-210ENST00000479080 VAV3Q9UKW4 847 aa14.86□□□□□ -0.03
CHD3-210ENST00000479080 DHX15O43143 795 aaKnown RBP14.85□□□□□ -0.03
CHD3-210ENST00000479080 PRPHP41219 470 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 FLT3LGP49771 235 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 CALCRLQ16602 461 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 SHC4Q6S5L8 630 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 FBXO16Q8IX29 292 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms