RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PDHBP11177 359 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 CSPP1Q1MSJ5 1256 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 PTCRAQ6ISU1 281 aaPredicted RBP20.18■□□□□ 0.82
VIM-204ENST00000478746 C7orf31Q8N865 590 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 PI4K2BQ8TCG2 481 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 TCP11L1Q9NUJ3 509 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 HDAC6Q9UBN7 1215 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 GTF2IRD1Q9UHL9 959 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 INSL6Q9Y581 213 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 WDR19Q8NEZ3 1342 aa20.18■□□□□ 0.82
VIM-204ENST00000478746 IL9P15248 144 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 ARHGAP1Q07960 439 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 ZNF543Q08ER8 600 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 DGKDQ16760 1214 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 VPS53Q5VIR6 699 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 FBXO22Q8NEZ5 403 aa20.17■□□□□ 0.82
VIM-204ENST00000478746 GRXCR2A6NFK2 248 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 PTK7Q13308 1070 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 ALX1Q15699 326 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 PUS10Q3MIT2 529 aaKnown RBP20.16■□□□□ 0.82
VIM-204ENST00000478746 USH1GQ495M9 461 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 ALG1Q9BT22 464 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
VIM-204ENST00000478746 PSEN2P49810 448 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 STXBP2Q15833 593 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 NSUN6Q8TEA1 469 aaKnown RBP20.15■□□□□ 0.82
VIM-204ENST00000478746 TBC1D5Q92609 795 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 TTC14Q96N46 770 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 TAAR1Q96RJ0 339 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 C17orf80Q9BSJ5 609 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 KATNAL1Q9BW62 490 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 SIP14410 1827 aa20.15■□□□□ 0.82
VIM-204ENST00000478746 LGR5O75473 907 aa20.14■□□□□ 0.81
VIM-204ENST00000478746 PTPROQ16827 1216 aa20.14■□□□□ 0.81
VIM-204ENST00000478746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.14■□□□□ 0.81
VIM-204ENST00000478746 OTUD7AQ8TE49 926 aaPredicted RBP20.14■□□□□ 0.81
VIM-204ENST00000478746 MRPL38Q96DV4 380 aaKnown RBP20.14■□□□□ 0.81
VIM-204ENST00000478746 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
VIM-204ENST00000478746 MAF1Q9H063 256 aa20.14■□□□□ 0.81
VIM-204ENST00000478746 FGAP02671 866 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 AMHP03971 560 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 MRE11P49959 708 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 MFSD10Q14728 455 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 KIAA0753Q2KHM9 967 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 TRIM71Q2Q1W2 868 aaKnown RBP20.13■□□□□ 0.81
VIM-204ENST00000478746 TRAF7Q6Q0C0 670 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 MIER1Q8N108 512 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 NEK9Q8TD19 979 aa20.13■□□□□ 0.81
VIM-204ENST00000478746 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
VIM-204ENST00000478746 H3BQ06 376 aaPredicted RBP20.12■□□□□ 0.81
VIM-204ENST00000478746 DCXO43602 365 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 SNHG28P0DPA3 235 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 ZNF200P98182 395 aaPredicted RBP20.12■□□□□ 0.81
VIM-204ENST00000478746 LAMC2Q13753 1193 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 MBTPS1Q14703 1052 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
VIM-204ENST00000478746 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 SYTL5Q8TDW5 730 aaPredicted RBP20.12■□□□□ 0.81
VIM-204ENST00000478746 RMDN3Q96TC7 470 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
VIM-204ENST00000478746 POTEB3A0JP26 581 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 RBAK-RBAKDNI3L0D1 243 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 HAS3O00219 553 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 GOLGA8HP0CJ92 632 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 MX1P20591 662 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
VIM-204ENST00000478746 EPC2Q52LR7 807 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 POTEBQ6S5H4 581 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 EP400NLQ6ZTU2 488 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 DHX37Q8IY37 1157 aaKnown RBP20.11■□□□□ 0.81
VIM-204ENST00000478746 DBF4BQ8NFT6 615 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 WNT8BQ93098 351 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 EMID1Q96A84 441 aaPredicted RBP20.11■□□□□ 0.81
VIM-204ENST00000478746 SAMD11Q96NU1 681 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 HELLSQ9NRZ9 838 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 COL20A1Q9P218 1284 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 FAM50BQ9Y247 325 aa20.11■□□□□ 0.81
VIM-204ENST00000478746 KIAA1217Q5T5P2 1943 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 ABCB11O95342 1321 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 EMSYQ7Z589 1322 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
VIM-204ENST00000478746 F2P00734 622 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 ZNF286BP0CG31 522 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 TIGD5Q53EQ6 642 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 ARHGEF16Q5VV41 709 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 BANK1Q8NDB2 785 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 PPTC7Q8NI37 304 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 SP7Q8TDD2 431 aaPredicted RBP20.1■□□□□ 0.81
VIM-204ENST00000478746 KCNH6Q9H252 994 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 CPVLQ9H3G5 476 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 MRVI1Q9Y6F6 885 aa20.1■□□□□ 0.81
VIM-204ENST00000478746 RSPH10B2B2RC85 870 aa20.09■□□□□ 0.81
VIM-204ENST00000478746 RSPH10BP0C881 870 aa20.09■□□□□ 0.81
VIM-204ENST00000478746 THPOP40225 353 aa20.09■□□□□ 0.81
VIM-204ENST00000478746 NHLH1Q02575 133 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms