RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RASA1P20936 1047 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 ICAM3P32942 547 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
HDAC8-217ENST00000478743 POLA2Q14181 598 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 NSMFQ6X4W1 530 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 FEM1BQ9UK73 627 aa14.68□□□□□ -0.06
HDAC8-217ENST00000478743 ZBED9Q6R2W3 1325 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 EP300Q09472 2414 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 MYH7P12883 1935 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 SP100P23497 879 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 DNAJB1P25685 340 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 COL9A2Q14055 689 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 SESTD1Q86VW0 696 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 KIAA2013Q8IYS2 634 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 API5Q9BZZ5 524 aaKnown RBP14.67□□□□□ -0.06
HDAC8-217ENST00000478743 HDAC6Q9UBN7 1215 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 PCDHGC5Q9Y5F6 944 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 PLXNA4Q9HCM2 1894 aa14.67□□□□□ -0.06
HDAC8-217ENST00000478743 CEP250Q9BV73 2442 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 C5orf67F2Z3F1 127 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 NUBP1P53384 320 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 PPP2R5BQ15173 497 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 CTR9Q6PD62 1173 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-217ENST00000478743 GTF2IRD1Q9UHL9 959 aa14.66□□□□□ -0.06
HDAC8-217ENST00000478743 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 BCAR3O75815 825 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 GNAI2P04899 355 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 MMP3P08254 477 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 COASYQ13057 564 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 BAATQ14032 418 aaPredicted RBP14.65□□□□□ -0.06
HDAC8-217ENST00000478743 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 AFG1LQ8WV93 481 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
HDAC8-217ENST00000478743 NFIBO00712 420 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 PARNO95453 639 aaKnown RBP14.64□□□□□ -0.07
HDAC8-217ENST00000478743 MMP1P03956 469 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 BMP3P12645 472 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 PLEKHG4Q58EX7 1191 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 CEP95Q96GE4 821 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 ATP8A2Q9NTI2 1148 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 RAD50Q92878 1312 aa14.64□□□□□ -0.07
HDAC8-217ENST00000478743 GOLIM4O00461 696 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 KPNA6O60684 536 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 SURF6O75683 361 aaKnown RBP14.63□□□□□ -0.07
HDAC8-217ENST00000478743 BRD1O95696 1058 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 BMPR1AP36894 532 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 ST3GAL2Q16842 350 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 TKFCQ3LXA3 575 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 MCTP2Q6DN12 878 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 TMED8Q6PL24 325 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-217ENST00000478743 VN1R2Q8NFZ6 395 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 ALG1Q9BT22 464 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 IFIH1Q9BYX4 1025 aaKnown RBP14.63□□□□□ -0.07
HDAC8-217ENST00000478743 LMAN2LQ9H0V9 348 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 CDH22Q9UJ99 828 aa14.63□□□□□ -0.07
HDAC8-217ENST00000478743 ISY1Q9ULR0 285 aaKnown RBP14.63□□□□□ -0.07
HDAC8-217ENST00000478743 NRIP1P48552 1158 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 PTK7Q13308 1070 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 BRDTQ58F21 947 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-217ENST00000478743 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
HDAC8-217ENST00000478743 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 GMCL1P1Q8NEA9 526 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 SSH3Q8TE77 659 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 SUSD6Q92537 303 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 C11orf84Q9BUA3 381 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-217ENST00000478743 C1orf115Q9H7X2 142 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 RC3H2Q9HBD1 1191 aaKnown RBP14.62□□□□□ -0.07
HDAC8-217ENST00000478743 DLL3Q9NYJ7 618 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 SPTBN2O15020 2390 aa14.62□□□□□ -0.07
HDAC8-217ENST00000478743 KIAA1217Q5T5P2 1943 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 PRDM1O75626 825 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 ZNF286BP0CG31 522 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 TXNP10599 105 aaKnown RBP14.61□□□□□ -0.07
HDAC8-217ENST00000478743 HOXB3P14651 431 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-217ENST00000478743 STAT2P52630 851 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 ARHGAP1Q07960 439 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 PUM1Q14671 1186 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC8-217ENST00000478743 CWF19L1Q69YN2 538 aaKnown RBP14.61□□□□□ -0.07
HDAC8-217ENST00000478743 FIBCD1Q8N539 461 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 KREMEN2Q8NCW0 462 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
HDAC8-217ENST00000478743 CCPG1Q9ULG6 757 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 ADGRA3Q8IWK6 1321 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 MYO10Q9HD67 2058 aa14.61□□□□□ -0.07
HDAC8-217ENST00000478743 NKRFO15226 690 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC8-217ENST00000478743 EDNRBP24530 442 aa14.6□□□□□ -0.07
HDAC8-217ENST00000478743 ADD2P35612 726 aa14.6□□□□□ -0.07
HDAC8-217ENST00000478743 PSEN2P49810 448 aa14.6□□□□□ -0.07
HDAC8-217ENST00000478743 PDE4BQ07343 736 aa14.6□□□□□ -0.07
HDAC8-217ENST00000478743 SLFN5Q08AF3 891 aa14.6□□□□□ -0.07
HDAC8-217ENST00000478743 IKQ13123 557 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-217ENST00000478743 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms