RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 PGM5Q15124 567 aa22.05■■□□□ 1.12
EPHB4-205ENST00000478459 RNF20Q5VTR2 975 aa22.05■■□□□ 1.12
EPHB4-205ENST00000478459 HIPK3Q9H422 1215 aa22.05■■□□□ 1.12
EPHB4-205ENST00000478459 SCN5AQ14524 2016 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 GH1P01241 217 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 BRDTQ58F21 947 aaPredicted RBP22.04■■□□□ 1.12
EPHB4-205ENST00000478459 USP17L6PQ6QN14 398 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 C16orf59Q7L2K0 433 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 SCLYQ96I15 445 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 ALDH8A1Q9H2A2 487 aaPredicted RBP22.04■■□□□ 1.12
EPHB4-205ENST00000478459 RTEL1Q9NZ71 1219 aa22.04■■□□□ 1.12
EPHB4-205ENST00000478459 SEC63Q9UGP8 760 aaKnown RBP22.04■■□□□ 1.12
EPHB4-205ENST00000478459 DDX41Q9UJV9 622 aaKnown RBP22.04■■□□□ 1.12
EPHB4-205ENST00000478459 SCN10AQ9Y5Y9 1956 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 A6NJR5 290 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 EIF3JO75822 258 aaKnown RBP22.03■■□□□ 1.12
EPHB4-205ENST00000478459 RGS20O76081 388 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 MMP3P08254 477 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 SPZ1Q9BXG8 430 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 BCAS3Q9H6U6 928 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
EPHB4-205ENST00000478459 LIFRP42702 1097 aa22.02■■□□□ 1.12
EPHB4-205ENST00000478459 FAM109BQ6ICB4 259 aaPredicted RBP22.02■■□□□ 1.12
EPHB4-205ENST00000478459 TMTC2Q8N394 836 aa22.02■■□□□ 1.12
EPHB4-205ENST00000478459 TMEM199Q8N511 208 aa22.02■■□□□ 1.12
EPHB4-205ENST00000478459 SMARCC2Q8TAQ2 1214 aa22.02■■□□□ 1.12
EPHB4-205ENST00000478459 GRXCR1A8MXD5 290 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 ZNF286BP0CG31 522 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 CCND2P30279 289 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 SP2Q02086 613 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 ZNF365Q70YC5 407 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 DHX37Q8IY37 1157 aaKnown RBP22.01■■□□□ 1.11
EPHB4-205ENST00000478459 FANCBQ8NB91 859 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 ALG1Q9BT22 464 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 NOC4LQ9BVI4 516 aaKnown RBP22.01■■□□□ 1.11
EPHB4-205ENST00000478459 WNT8AQ9H1J5 351 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 MTMR10Q9NXD2 777 aa22.01■■□□□ 1.11
EPHB4-205ENST00000478459 TRIP12Q14669 1992 aaPredicted RBP22■■□□□ 1.11
EPHB4-205ENST00000478459 EXOSC10Q01780 885 aaKnown RBP22■■□□□ 1.11
EPHB4-205ENST00000478459 GHRHRQ02643 423 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 PPIGQ13427 754 aaKnown RBP eCLIP22■■□□□ 1.116e-8■□□□□ 10.2
EPHB4-205ENST00000478459 UBE2SQ16763 222 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 TMEM240Q5SV17 173 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 SYNE3Q6ZMZ3 975 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 TMTC3Q6ZXV5 915 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 HEATR3Q7Z4Q2 680 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 VSIG10LQ86VR7 867 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 JAKMIP1Q96N16 626 aaKnown RBP22■■□□□ 1.11
EPHB4-205ENST00000478459 MAP3K14Q99558 947 aa22■■□□□ 1.11
EPHB4-205ENST00000478459 KLF18A0A0U1RQI7 1052 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 GGPS1O95749 300 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 CALM1P0DP23 149 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 CALM2P0DP24 149 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 CALM3P0DP25 149 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 GNAQP50148 359 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 FGD1P98174 961 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 TRAF1Q13077 416 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 APOA5Q6Q788 366 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 DHX32Q7L7V1 743 aaKnown RBP21.99■■□□□ 1.11
EPHB4-205ENST00000478459 DEFB128Q7Z7B8 93 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 LZTS2Q9BRK4 669 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 MTA3Q9BTC8 594 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 MAF1Q9H063 256 aa21.99■■□□□ 1.11
EPHB4-205ENST00000478459 GBF1Q92538 1859 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 UBA1P22314 1058 aaKnown RBP21.98■■□□□ 1.11
EPHB4-205ENST00000478459 MRPS9P82933 396 aaKnown RBP21.98■■□□□ 1.11
EPHB4-205ENST00000478459 ZNF697Q5TEC3 545 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 OTOP2Q7RTS6 562 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 KAT2BQ92831 832 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 CUL5Q93034 780 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 SPATA33Q96N06 139 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 MAP3K20Q9NYL2 800 aaKnown RBP21.98■■□□□ 1.11
EPHB4-205ENST00000478459 NOD1Q9Y239 953 aa21.98■■□□□ 1.11
EPHB4-205ENST00000478459 GOLGA8AA7E2F4 631 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 GOLGA8BA8MQT2 603 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 MEIS2O14770 477 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 ZBTB43O43298 467 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 PPFIA3O75145 1194 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 SP4Q02446 784 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 RTN1Q16799 776 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 SGMS1Q86VZ5 419 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 GUCD1Q96NT3 240 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 IL23AQ9NPF7 189 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 CXXC1Q9P0U4 656 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-205ENST00000478459 TELO2Q9Y4R8 837 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 SNX14Q9Y5W7 946 aa21.97■■□□□ 1.11
EPHB4-205ENST00000478459 KPNA6O60684 536 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 CASTP20810 708 aaKnown RBP21.96■■□□□ 1.11
EPHB4-205ENST00000478459 PBX2P40425 430 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 PSEN2P49810 448 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 LAMC2Q13753 1193 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 DGKDQ16760 1214 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 HSDL1Q3SXM5 330 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 CELF3Q5SZQ8 465 aaKnown RBP21.96■■□□□ 1.11
EPHB4-205ENST00000478459 MYSM1Q5VVJ2 828 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 GDF6Q6KF10 455 aaPredicted RBP21.96■■□□□ 1.11
EPHB4-205ENST00000478459 GPR153Q6NV75 609 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 Q6ZUG5 572 aa21.96■■□□□ 1.11
EPHB4-205ENST00000478459 MLXIPQ9HAP2 919 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms