RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 KIF15Q9NS87 1388 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 C9orf84Q5VXU9 1444 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ANKRD50Q9ULJ7 1429 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 ERCC6Q03468 1493 aa5.64□□□□□ -1.51
GPNMB-210ENST00000478451 B2RBV5 119 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 ABLIM1O14639 778 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 VIPR1P32241 457 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 ETFBP38117 255 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 LINC00310P59036 64 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 MVKQ03426 396 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 RAB3GAP1Q15042 981 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 C6orf15Q6UXA7 325 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-210ENST00000478451 FAM178BQ8IXR5 827 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 FAM9BQ8IZU0 186 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 CRACR2BQ8N4Y2 399 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-210ENST00000478451 GMLQ99445 158 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 APBA2Q99767 749 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 SGPP1Q9BX95 441 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 GCM1Q9NP62 436 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 KLHL14Q9P2G3 628 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 PPP1R1BQ9UD71 204 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-210ENST00000478451 MBD1Q9UIS9 605 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-210ENST00000478451 NUP160Q12769 1436 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 ABCC10Q5T3U5 1492 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 CCDC141Q6ZP82 1450 aa5.63□□□□□ -1.51
GPNMB-210ENST00000478451 RNF17Q9BXT8 1623 aaKnown RBP5.63□□□□□ -1.51
GPNMB-210ENST00000478451 C2orf71A6NGG8 1288 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 NUDT19A8MXV4 375 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 KCNH1O95259 989 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 L1CAMP32004 1257 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 SEPHS1P49903 392 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 CORO7P57737 925 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 TMEM62Q0P6H9 643 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 TMC6Q7Z403 805 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 BVESQ8NE79 360 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 PPP1R14AQ96A00 147 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 ZNF408Q9H9D4 720 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 SIRT5Q9NXA8 310 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 NUDCQ9Y266 331 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 EMC9Q9Y3B6 208 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 BRD4O60885 1362 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-210ENST00000478451 PRG4Q92954 1404 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-210ENST00000478451 PLB1Q6P1J6 1458 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 PLEKHH2Q8IVE3 1493 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 SAMD9LQ8IVG5 1584 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 SHROOM2Q13796 1616 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 CHD1O14646 1710 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 CEP152O94986 1710 aa5.62□□□□□ -1.51
GPNMB-210ENST00000478451 A0A1W2PQJ5 194 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 NOP56O00567 594 aaKnown RBP5.61□□□□□ -1.51
GPNMB-210ENST00000478451 INSRP06213 1382 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 PTPRGP23470 1445 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 TACR1P25103 407 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 RALBP1Q15311 655 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 POMZP3Q6PJE2 187 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 RPTNQ6XPR3 784 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 DHX29Q7Z478 1369 aaKnown RBP5.61□□□□□ -1.51
GPNMB-210ENST00000478451 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 PDLIM7Q9NR12 457 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 FAM135AQ9P2D6 1515 aa5.61□□□□□ -1.51
GPNMB-210ENST00000478451 SPHKAPQ2M3C7 1700 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 KIAA1210Q9ULL0 1709 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 PRDM15P57071 1507 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-210ENST00000478451 TRBV23OR9-2A0A075B6M9 112 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 PLEKHD1A6NEE1 506 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 SRGAP3O43295 1099 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 NUAK1O60285 661 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 DBHP09172 617 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 PAMP19021 973 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 HOXA5P20719 270 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 EPHB3P54753 998 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 SCRN1Q12765 414 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 CBX2Q14781 532 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-210ENST00000478451 SF3A1Q15459 793 aaKnown RBP5.6□□□□□ -1.51
GPNMB-210ENST00000478451 FXNQ16595 210 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 NBPF8Q3BBV2 869 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 PLEKHN1Q494U1 663 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-210ENST00000478451 BICRALQ6AI39 1079 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 CIAPIN1Q6FI81 312 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 TRIM59Q8IWR1 403 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 LGR4Q9BXB1 951 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 CNTD2Q9H8S5 307 aa5.6□□□□□ -1.51
GPNMB-210ENST00000478451 VIRMAQ69YN4 1812 aaKnown RBP5.6□□□□□ -1.51
GPNMB-210ENST00000478451 IQGAP1P46940 1657 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 NUP155O75694 1391 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 MYBBP1AQ9BQG0 1328 aaKnown RBP5.59□□□□□ -1.51
GPNMB-210ENST00000478451 WASHC2CQ9Y4E1 1318 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 SUSD5O60279 629 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 DDAH1O94760 285 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 CYBBP04839 570 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 ATP2B1P20020 1258 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 ANP32AP39687 249 aaKnown RBP5.59□□□□□ -1.51
GPNMB-210ENST00000478451 MAPKAPK2P49137 400 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 CDR1P51861 262 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 NR1I3Q14994 352 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms