RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
CBWD3-206ENST00000478048 PFASO15067 1338 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 MCM3APO60318 1980 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 ESYT2A0FGR8 921 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
CBWD3-206ENST00000478048 DPYSL4O14531 572 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 ADCY7P51828 1080 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 NLRP5P59047 1200 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 CCL14Q16627 93 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 ZNF792Q3KQV3 632 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 TAAR1Q96RJ0 339 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
CBWD3-206ENST00000478048 CENPFP49454 3210 aa13.15□□□□□ -0.3
CBWD3-206ENST00000478048 RGS20O76081 388 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 GNRH1P01148 92 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 HOXC6P09630 235 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 HOXD10P28358 340 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 RGS2P41220 211 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 ARHGEF6Q15052 776 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 KRT40Q6A162 431 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-206ENST00000478048 CUL5Q93034 780 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 TMEM260Q9NX78 707 aa13.14□□□□□ -0.31
CBWD3-206ENST00000478048 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-206ENST00000478048 PIK3CDO00329 1044 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 XBP1P17861 261 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
CBWD3-206ENST00000478048 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
CBWD3-206ENST00000478048 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
CBWD3-206ENST00000478048 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
CBWD3-206ENST00000478048 GNA11P29992 359 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 BECN1Q14457 450 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 APBA2Q99767 749 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
CBWD3-206ENST00000478048 PCDHA4Q9UN74 947 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 PTCH2Q9Y6C5 1203 aa13.13□□□□□ -0.31
CBWD3-206ENST00000478048 M0R2N6 131 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 MMP1P03956 469 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 XRCC5P13010 732 aaKnown RBP13.12□□□□□ -0.31
CBWD3-206ENST00000478048 ELNP15502 786 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 EIF2AK2P19525 551 aaKnown RBP13.12□□□□□ -0.31
CBWD3-206ENST00000478048 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-206ENST00000478048 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 IRF5Q13568 498 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 TRIB2Q92519 343 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 MAF1Q9H063 256 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
CBWD3-206ENST00000478048 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
CBWD3-206ENST00000478048 ADCY3O60266 1144 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
CBWD3-206ENST00000478048 TRIM32Q13049 653 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 NR5A1Q13285 461 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 TRIM29Q14134 588 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
CBWD3-206ENST00000478048 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
CBWD3-206ENST00000478048 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 SLC5A4Q9NY91 659 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 MYH7BA7E2Y1 1941 aa13.11□□□□□ -0.31
CBWD3-206ENST00000478048 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 IGHA2P01877 340 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 CYP2C19P33261 490 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 PRMT2P55345 433 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
CBWD3-206ENST00000478048 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
CBWD3-206ENST00000478048 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 BICD2Q8TD16 824 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 KRT2P35908 639 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 PGM5Q15124 567 aa13.1□□□□□ -0.31
CBWD3-206ENST00000478048 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms