RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 CMTR1Q8N1G2 835 aaKnown RBP15.94■□□□□ 0.14
HDAC7-222ENST00000477937 PPP1R12CQ9BZL4 782 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 TRPV6Q9H1D0 765 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 ALDH8A1Q9H2A2 487 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-222ENST00000477937 SUPT20HL2P0C7V6 817 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 CCND2P30279 289 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 EPHB4P54760 987 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 ARHGAP1Q07960 439 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 PPIGQ13427 754 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC7-222ENST00000477937 NBPF20Q3BBV1 942 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 APOA5Q6Q788 366 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 RAB11FIP4Q86YS3 637 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 CCDC82Q8N4S0 544 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 AFG1LQ8WV93 481 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 CUL5Q93034 780 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 HIPK3Q9H422 1215 aa15.93■□□□□ 0.14
HDAC7-222ENST00000477937 REC8O95072 547 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 MMP3P08254 477 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 TGFB3P10600 412 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
HDAC7-222ENST00000477937 CYP2C18P33260 490 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 LAMC2Q13753 1193 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 FAM47CQ5HY64 1035 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
HDAC7-222ENST00000477937 DEFB123Q8N688 67 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 EMID1Q96A84 441 aaPredicted RBP15.92■□□□□ 0.14
HDAC7-222ENST00000477937 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
HDAC7-222ENST00000477937 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
HDAC7-222ENST00000477937 RBM28Q9NW13 759 aaKnown RBP15.92■□□□□ 0.14
HDAC7-222ENST00000477937 LAMA3Q16787 3333 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 TRIP12Q14669 1992 aaPredicted RBP15.91■□□□□ 0.14
HDAC7-222ENST00000477937 PIK3CDO00329 1044 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 ZBTB43O43298 467 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 RGS20O76081 388 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 CSF2RAP15509 400 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 HSPA4P34932 840 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 FGD1P98174 961 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 PTPN11Q06124 597 aaPredicted RBP15.91■□□□□ 0.14
HDAC7-222ENST00000477937 DGKDQ16760 1214 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 KCNB2Q92953 911 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
HDAC7-222ENST00000477937 MEIS2O14770 477 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 STAM2O75886 525 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 CHMP4BP1P59074 171 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 ERICH6BQ5W0A0 696 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 USP17L6PQ6QN14 398 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 Q7L0L9 218 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 ZFP91Q96JP5 570 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-222ENST00000477937 NOC4LQ9BVI4 516 aaKnown RBP15.9■□□□□ 0.14
HDAC7-222ENST00000477937 PSTPIP2Q9H939 334 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 TRMT13Q9NUP7 481 aaKnown RBP15.9■□□□□ 0.14
HDAC7-222ENST00000477937 PPP4R2Q9NY27 417 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
HDAC7-222ENST00000477937 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 hCG_1642624A0A1W2PR95 340 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
HDAC7-222ENST00000477937 RTN1Q16799 776 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 GNPTABQ3T906 1256 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 CELF3Q5SZQ8 465 aaKnown RBP15.89■□□□□ 0.13
HDAC7-222ENST00000477937 MYSM1Q5VVJ2 828 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 FAM109BQ6ICB4 259 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-222ENST00000477937 BLOC1S2Q6QNY1 142 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 JAKMIP1Q96N16 626 aaKnown RBP15.89■□□□□ 0.13
HDAC7-222ENST00000477937 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.138e-7■■■■■ 32.7
HDAC7-222ENST00000477937 IL23AQ9NPF7 189 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 SNX14Q9Y5W7 946 aa15.89■□□□□ 0.13
HDAC7-222ENST00000477937 GGPS1O95749 300 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 ACRP10323 421 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 CYP2C9P11712 490 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 CPA1P15085 419 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 PSMA5P28066 241 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 CCL23P55773 120 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 MRPS9P82933 396 aaKnown RBP15.88■□□□□ 0.13
HDAC7-222ENST00000477937 SP2Q02086 613 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 PCNX4Q63HM2 1172 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 XRRA1Q6P2D8 792 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 PSRC1Q6PGN9 363 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-222ENST00000477937 ZNF365Q70YC5 407 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 C16orf59Q7L2K0 433 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 PPP1R13LQ8WUF5 828 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 INPP4AQ96PE3 977 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-222ENST00000477937 KATNAL1Q9BW62 490 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 MLXIPQ9HAP2 919 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 MTMR10Q9NXD2 777 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 NAP1L2Q9ULW6 460 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-222ENST00000477937 NOD1Q9Y239 953 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 SCN5AQ14524 2016 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 UMODL1Q5DID0 1318 aa15.88■□□□□ 0.13
HDAC7-222ENST00000477937 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms