RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 NBPF5PQ86XG9 351 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 JMYQ8N9B5 988 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 CCDC191Q8NCU4 936 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 PANK1Q8TE04 598 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 DDX11Q96FC9 970 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 NBPF4Q96M43 638 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 UBXN6Q9BZV1 441 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 PICK1Q9NRD5 415 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 POLKQ9UBT6 870 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 EGFL7Q9UHF1 273 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 KCNG1Q9UIX4 513 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 SERPINA10Q9UK55 444 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 RRP15Q9Y3B9 282 aaKnown RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 TULP4Q9NRJ4 1543 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 ITSN1Q15811 1721 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 KIF24Q5T7B8 1368 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 DISP3Q9P2K9 1392 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 A0A087WUV0 522 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 KLHL33A6NCF5 533 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 APAF1O14727 1248 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 LRIG2O94898 1065 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 BMP6P22004 513 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 TRHRP34981 398 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 SERPINB4P48594 390 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 GSDMDP57764 484 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 TPD52L1Q16890 204 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 CT47A1Q5JQC4 288 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 SFRP5Q5T4F7 317 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 TTLL5Q6EMB2 1281 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 SYT10Q6XYQ8 523 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 HDGFL2Q7Z4V5 671 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 CERS3Q8IU89 383 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 GLYCTKQ8IVS8 523 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 C10orf67Q8IYJ2 551 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 NGDNQ8NEJ9 315 aaKnown RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 RIN3Q8TB24 985 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 UBE2FQ969M7 185 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 RUNDC1Q96C34 613 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 EMILIN2Q9BXX0 1053 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 L2HGDHQ9H9P8 463 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 TPX2Q9ULW0 747 aaKnown RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 SUFUQ9UMX1 484 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 AKAP2Q9Y2D5 859 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 LRRFIP2Q9Y608 721 aaKnown RBP5.45□□□□□ -1.54
PTCD3-212ENST00000477520 FMN2Q9NZ56 1722 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 IL16Q14005 1332 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 C1orf167Q5SNV9 1468 aa5.45□□□□□ -1.54
PTCD3-212ENST00000477520 PES1O00541 588 aaKnown RBP5.44□□□□□ -1.54
PTCD3-212ENST00000477520 PAGE1O75459 146 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 ZRANB2O95218 330 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTCD3-212ENST00000477520 PNMA6AP0CW24 399 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-212ENST00000477520 SRFP11831 508 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 HK2P52789 917 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 CORO7P57737 925 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 SARNPP82979 210 aaKnown RBP5.44□□□□□ -1.54
PTCD3-212ENST00000477520 TUBB2AQ13885 445 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 SLBPQ14493 270 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTCD3-212ENST00000477520 ALDH1L2Q3SY69 923 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 CCDC158Q5M9N0 1113 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 RASIP1Q5U651 963 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 CCDC30Q5VVM6 783 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 MYLIPQ8WY64 445 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 ITFG2Q969R8 447 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 CCDC120Q96HB5 630 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 TUBB2BQ9BVA1 445 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 BCO2Q9BYV7 579 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 ACBD3Q9H3P7 528 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 SP110Q9HB58 689 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 ZBTB40Q9NUA8 1239 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 IFT57Q9NWB7 429 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 FHOD1Q9Y613 1164 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 NPHP3Q7Z494 1330 aa5.44□□□□□ -1.54
PTCD3-212ENST00000477520 MST1RQ04912 1400 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 PPIP5K1Q6PFW1 1433 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 EFCAB8A8MWE9 144 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 H0YHG0 523 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 CTAGE5O15320 804 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 SMC2O95347 1197 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 HPXP02790 462 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 ESR1P03372 595 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
PTCD3-212ENST00000477520 RAC2P15153 192 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 NKG7Q16617 165 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 FBXO38Q6PIJ6 1188 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 SARM1Q6SZW1 724 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 ATF7IPQ6VMQ6 1270 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 THAP5Q7Z6K1 395 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 SPATS2Q86XZ4 545 aaKnown RBP5.43□□□□□ -1.54
PTCD3-212ENST00000477520 OTUD6BQ8N6M0 293 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 GPATCH11Q8N954 259 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 DNAAF4Q8WXU2 420 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 UBXN4Q92575 508 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 ARHGAP45Q92619 1136 aa5.43□□□□□ -1.54
PTCD3-212ENST00000477520 NECAB3Q96P71 396 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms