RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
COMMD6-209ENST00000477377 MRPS9P82933 396 aaKnown RBP17.98■□□□□ 0.47
COMMD6-209ENST00000477377 SP2Q02086 613 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 USP17L6PQ6QN14 398 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 Q6ZUG5 572 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 FCHSD1Q86WN1 690 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
COMMD6-209ENST00000477377 VTI1AQ96AJ9 217 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 JAKMIP1Q96N16 626 aaKnown RBP17.98■□□□□ 0.47
COMMD6-209ENST00000477377 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 PRKAG2Q9UGJ0 569 aa17.98■□□□□ 0.47
COMMD6-209ENST00000477377 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
COMMD6-209ENST00000477377 REC8O95072 547 aa17.97■□□□□ 0.47
COMMD6-209ENST00000477377 C9orf50Q5SZB4 431 aa17.97■□□□□ 0.47
COMMD6-209ENST00000477377 TYW1BQ6NUM6 668 aa17.97■□□□□ 0.47
COMMD6-209ENST00000477377 LBHD1Q9BQE6 289 aaPredicted RBP17.97■□□□□ 0.47
COMMD6-209ENST00000477377 SCN10AQ9Y5Y9 1956 aa17.97■□□□□ 0.47
COMMD6-209ENST00000477377 KLF18A0A0U1RQI7 1052 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 ZBTB43O43298 467 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 TIMP1P01033 207 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
COMMD6-209ENST00000477377 MYCLP12524 364 aaPredicted RBP17.96■□□□□ 0.47
COMMD6-209ENST00000477377 RPS6KB1P23443 525 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 CPT1AP50416 773 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 APOBRQ0VD83 1088 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 SEMA3FQ13275 785 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 SHHQ15465 462 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 AFG1LQ8WV93 481 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 EMID1Q96A84 441 aaPredicted RBP17.96■□□□□ 0.47
COMMD6-209ENST00000477377 BCAS3Q9H6U6 928 aa17.96■□□□□ 0.47
COMMD6-209ENST00000477377 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
COMMD6-209ENST00000477377 MROH7Q68CQ1 1323 aa17.96■□□□□ 0.46
COMMD6-209ENST00000477377 B4GALT4O60513 344 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 MMP3P08254 477 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 MYL3P08590 195 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
COMMD6-209ENST00000477377 RCAN1P53805 252 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 EVCP57679 992 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 RTN1Q16799 776 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 PPP1R13LQ8WUF5 828 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 KAT2BQ92831 832 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 BRF1Q92994 677 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 TRPV6Q9H1D0 765 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 ZSWIM6Q9HCJ5 1215 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 POLR3EQ9NVU0 708 aa17.95■□□□□ 0.46
COMMD6-209ENST00000477377 SEC63Q9UGP8 760 aaKnown RBP17.95■□□□□ 0.46
COMMD6-209ENST00000477377 NID2Q14112 1375 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 GH1P01241 217 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 RAG1P15918 1043 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 VWCEQ96DN2 955 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 MTG1Q9BT17 334 aaPredicted RBP17.94■□□□□ 0.46
COMMD6-209ENST00000477377 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
COMMD6-209ENST00000477377 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
COMMD6-209ENST00000477377 UMODL1Q5DID0 1318 aa17.94■□□□□ 0.46
COMMD6-209ENST00000477377 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
COMMD6-209ENST00000477377 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
COMMD6-209ENST00000477377 CCND2P30279 289 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 ICAM3P32942 547 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 TOB2Q14106 344 aaPredicted RBP17.93■□□□□ 0.46
COMMD6-209ENST00000477377 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 MYSM1Q5VVJ2 828 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 INPP4AQ96PE3 977 aaPredicted RBP17.93■□□□□ 0.46
COMMD6-209ENST00000477377 CTAGE1Q96RT6 745 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 TRMT13Q9NUP7 481 aaKnown RBP17.93■□□□□ 0.46
COMMD6-209ENST00000477377 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
COMMD6-209ENST00000477377 GOLGA8AA7E2F4 631 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 GOLGA8BA8MQT2 603 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 KPNA6O60684 536 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
COMMD6-209ENST00000477377 NTRK3Q16288 839 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 UBE2SQ16763 222 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 HSDL1Q3SXM5 330 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 CELF3Q5SZQ8 465 aaKnown RBP17.92■□□□□ 0.46
COMMD6-209ENST00000477377 RUFY3Q7L099 469 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
COMMD6-209ENST00000477377 SPATA31C2B4DYI2 1134 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 STXBP3O00186 592 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 TGFB3P10600 412 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 PSMA5P28066 241 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 CYP2C18P33260 490 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 LAMC2Q13753 1193 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 PKN1Q16512 942 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 PCNX4Q63HM2 1172 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 KCNV1Q6PIU1 500 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 PPTC7Q8NI37 304 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
COMMD6-209ENST00000477377 PPP1R12CQ9BZL4 782 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 MYH7BA7E2Y1 1941 aa17.91■□□□□ 0.46
COMMD6-209ENST00000477377 HAS3O00219 553 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms