RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LONP1P36776 959 aaKnown RBP20.2■□□□□ 0.82
VARS2-209ENST00000477288 ADCY1Q08828 1119 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 OLA1Q9NTK5 396 aaKnown RBP20.2■□□□□ 0.82
VARS2-209ENST00000477288 TTLL1O95922 423 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 SERPINB2P05120 415 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 EEF1GP26641 437 aaKnown RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 ACTN1P12814 892 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 TPX2Q9ULW0 747 aaKnown RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 PPP2R2CQ9Y2T4 447 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 CFAP65Q6ZU64 1925 aaKnown RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 NACC1Q96RE7 527 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 JPH2Q9BR39 696 aaPredicted RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 PASKQ96RG2 1323 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 FOXD4Q12950 439 aaPredicted RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 CCNYQ8ND76 341 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 CAPS2Q9BXY5 557 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 LEMD3Q9Y2U8 911 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 ASPRV1Q53RT3 343 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 ZNF449Q6P9G9 518 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 ZBTB33Q86T24 672 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 ANKRD13CQ8N6S4 541 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 IFT122Q9HBG6 1241 aa20.19■□□□□ 0.82
VARS2-209ENST00000477288 CPSF3Q9UKF6 684 aaKnown RBP20.19■□□□□ 0.82
VARS2-209ENST00000477288 BRD3Q15059 726 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 ZNF653Q96CK0 615 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 RAD17O75943 681 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 CLTAP09496 248 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 RXRBP28702 533 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 RASSF7Q02833 373 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 EEF2KMTQ96G04 330 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 SLC12A6Q9UHW9 1150 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 ADCY9O60503 1353 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 GCC2Q8IWJ2 1684 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 BPIFB4P59827 614 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 PPP2R5EQ16537 467 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
VARS2-209ENST00000477288 CLIC4Q9Y696 253 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 EHHADHQ08426 723 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 SNX1Q13596 522 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 STX1BP61266 288 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 CACNB1Q02641 598 aaPredicted RBP20.18■□□□□ 0.82
VARS2-209ENST00000477288 C7orf31Q8N865 590 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 USP44Q9H0E7 712 aa20.18■□□□□ 0.82
VARS2-209ENST00000477288 HEXIM1O94992 359 aaKnown RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 GPATCH4Q5T3I0 446 aaKnown RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 PCIF1Q9H4Z3 704 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 DYNLL1P63167 89 aaKnown RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 EXOC8Q8IYI6 725 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 CEP170P1Q96L14 293 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 FGD4Q96M96 766 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 ASAP1Q9ULH1 1129 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 FAF1Q9UNN5 650 aaPredicted RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 GOLGA8SH3BPF8 625 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 PDE8BO95263 885 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 TFAMQ00059 246 aaKnown RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 RASGRP4Q8TDF6 673 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 CNOT6LQ96LI5 555 aaKnown RBP20.17■□□□□ 0.82
VARS2-209ENST00000477288 LMCD1Q9NZU5 365 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
VARS2-209ENST00000477288 MYO1FO00160 1098 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 CMA1P23946 247 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 GUCY2DQ02846 1103 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 ERFEQ4G0M1 354 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 ACCSQ96QU6 501 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.16■□□□□ 0.82
VARS2-209ENST00000477288 GSTA4O15217 222 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 OSTNP61366 133 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 PPP4R4Q6NUP7 873 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
VARS2-209ENST00000477288 LMBRD1Q9NUN5 540 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
VARS2-209ENST00000477288 ZSCAN26Q16670 478 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 FANCLQ9NW38 375 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 ABCA8O94911 1581 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 PDCD7Q8N8D1 485 aaKnown RBP20.16■□□□□ 0.82
VARS2-209ENST00000477288 PPP1R9AQ9ULJ8 1098 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 IFNAR2P48551 515 aa20.16■□□□□ 0.82
VARS2-209ENST00000477288 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.16■□□□□ 0.82
VARS2-209ENST00000477288 DYNLT1P63172 113 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 SSH3Q8TE77 659 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 PSMC2P35998 433 aaKnown RBP20.15■□□□□ 0.82
VARS2-209ENST00000477288 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 MIGA2Q7L4E1 593 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 CDC26Q8NHZ8 85 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 LARP4BQ92615 738 aaKnown RBP20.15■□□□□ 0.82
VARS2-209ENST00000477288 UBN2Q6ZU65 1347 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 NR2F2P24468 414 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms