RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 KLRC3Q07444 240 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TRIM60Q495X7 471 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 SNRNP48Q6IEG0 339 aaKnown RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 B4GALNT3Q6L9W6 998 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ANKRD35Q8N283 1001 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 CHURC1Q8WUH1 139 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 FOXD4L4Q8WXT5 416 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 STRBPQ96SI9 672 aaKnown RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 STARD7Q9NQZ5 370 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 LTBP2Q14767 1821 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ZEB2O60315 1214 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TTLL1O95922 423 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TSPY3P0CV98 308 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TSPY8P0CW00 308 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 WEE1P30291 646 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ANO1Q5XXA6 986 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 Q7L0L9 218 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 FAM160B2Q86V87 743 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 SIAH1Q8IUQ4 282 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 RGS22Q8NE09 1264 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 BADQ92934 168 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 FERMT2Q96AC1 680 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 GLT1D1Q96MS3 346 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TOX2Q96NM4 488 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TSPAN10Q9H1Z9 355 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ABHD16BQ9H3Z7 469 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 CLIP2Q9UDT6 1046 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
BRCA1-214ENST00000477152 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
BRCA1-214ENST00000477152 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 DUSP11O75319 330 aaKnown RBP8.6□□□□□ -1.03
BRCA1-214ENST00000477152 FPGSQ05932 587 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 MTMR3Q13615 1198 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 TKFCQ3LXA3 575 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 FAM47AQ5JRC9 791 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 PRAMEF19Q5SWL8 479 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 MKL1Q969V6 931 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 AGBL1Q96MI9 1066 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 PUS7LQ9H0K6 701 aaKnown RBP8.6□□□□□ -1.03
BRCA1-214ENST00000477152 MTIF3Q9H2K0 278 aaKnown RBP8.6□□□□□ -1.03
BRCA1-214ENST00000477152 ZHX1Q9UKY1 873 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-214ENST00000477152 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-214ENST00000477152 SMCHD1A6NHR9 2005 aa8.6□□□□□ -1.03
BRCA1-214ENST00000477152 CYP2D7A0A087X1C5 515 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 KIAA0355O15063 1070 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 ABL1P00519 1130 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 PGK2P07205 417 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 TLE2Q04725 743 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 IKQ13123 557 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 ZNF211Q13398 564 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 KIAA1755Q5JYT7 1200 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 MAMDC4Q6UXC1 1216 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 CCDC129Q6ZRS4 1044 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 CPXCR1Q8N123 301 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 GMCL1P1Q8NEA9 526 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 MPHOSPH6Q99547 160 aaKnown RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 NAPBQ9H115 298 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 DCTPP1Q9H773 170 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 PDLIM7Q9NR12 457 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 ELP1O95163 1332 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 GREB1LQ9C091 1923 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 A0A1W2PQ45 241 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 A0A1W2PQY0 241 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 ASB14A6NK59 587 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 GPAA1O43292 621 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 GDF9O60383 454 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 PQBP1O60828 265 aaKnown RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 CABYRO75952 493 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 NDUFB10O96000 172 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 BMP3P12645 472 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 STAT2P52630 851 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 ACLYP53396 1101 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 EPHA4P54764 986 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 PPIGQ13427 754 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■■■□ 20.9
BRCA1-214ENST00000477152 NAA30Q147X3 362 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 SHHQ15465 462 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 TAS1R3Q7RTX0 852 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 CLEC10AQ8IUN9 316 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 TMEM199Q8N511 208 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 KIFC2Q96AC6 838 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-214ENST00000477152 FBXO28Q9NVF7 368 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 USP3Q9Y6I4 520 aa8.59□□□□□ -1.03
BRCA1-214ENST00000477152 BRCA2P51587 3418 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 A0A0U1RQG5 324 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-214ENST00000477152 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms